PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010095602.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

FAR1

Protein Properties

Length: 243aa MW: 27764.7 Da PI: 9.4115

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010095602.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.6	7.8e-27	78	167	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY eYA++vGF vr+ + ++s +g++ r++ C+k+g++ ++k + e+++r++ r gC+a++ vk+ek+gkw+vt++++eHnH+l+ XP_010095602.1 78 SFYAEYASRVGFVVRVMQRRRSGIDGRTLARRLGCNKQGFSPNQKGALGPEKKPRPSAREGCNATILVKMEKSGKWVVTRFVKEHNHPLV 167 5***************************************************************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	8.2E-25	78	167	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence Send to blast
MTVPLRYKLR SAIAQLQISL QTKDTLFCFF RFRFPFMDLE KESGAMESSV EVDVGSSGGQ 60 ISEPYVGMEF ESEDAARSFY AEYASRVGFV VRVMQRRRSG IDGRTLARRL GCNKQGFSPN 120 QKGALGPEKK PRPSAREGCN ATILVKMEKS GKWVVTRFVK EHNHPLVVTA NGFSTEGDKD 180 KKIEELTMEL ERQEQLCATY REKLLSFMKN IEDETEELSA KIQVIVENVR RVESQVQKHS 240 RHR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010095602.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010095602.2	1e-152	protein FAR1-RELATED SEQUENCE 5
TrEMBL	W9QZE1	1e-180	W9QZE1_9ROSA; Uncharacterized protein
STRING	XP_010095602.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF965	31	104

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12850.1	4e-77	FAR1 family protein

Link Out ? help Back to Top
Entrez Gene	21390840