PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010095861.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB
Protein Properties Length: 296aa    MW: 33592.8 Da    PI: 4.6827
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010095861.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.91.7e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT+eEd +lv +v+++G  +W+  ++  g++R++k+c++rw +yl
   XP_010095861.1 14 KGTWTPEEDRKLVAYVTRYGCWNWRQLPKFAGLKRCGKSCRLRWMNYL 61
                     799*****************99************************97 PP
2Myb_DNA-binding53.46.1e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ ++eE+e ++ +++ lG++ W+tIa+ ++ gRt++++k++w+++l
   XP_010095861.1  67 RGNYSKEEEETIIGLHESLGNR-WSTIAAQLP-GRTDNEVKNHWHTHL 112
                      899*******************.*********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.424961IPR017930Myb domain
SuperFamilySSF466893.11E-2911108IPR009057Homeodomain-like
SMARTSM007173.5E-111363IPR001005SANT/Myb domain
PfamPF002494.4E-141461IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.0E-231568IPR009057Homeodomain-like
CDDcd001675.34E-101661No hitNo description
PROSITE profilePS5129425.36762116IPR017930Myb domain
SMARTSM007174.2E-1566114IPR001005SANT/Myb domain
PfamPF002498.6E-1567112IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-2569116IPR009057Homeodomain-like
CDDcd001674.66E-1169112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MVRTPYCDQN GMKKGTWTPE EDRKLVAYVT RYGCWNWRQL PKFAGLKRCG KSCRLRWMNY  60
LRPNLKRGNY SKEEEETIIG LHESLGNRWS TIAAQLPGRT DNEVKNHWHT HLKKRVKVLH  120
NSGEHAYQEV ESAEGSNDNN ATFLNSPNDS TNNTNQHQSS AIMDAKENTS FPNPETLPYN  180
INILDSNSPF VMSPQPSSSD EASTISTDSS NITTTETSTN NYLVADSCCN PLEDAYAEFS  240
DNFWTEPFLA DNSYTPSDFF TSLMDTEFFS SEFDANLLFS STGGNLYEEP IQASLY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A3e-27121165108B-MYB
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010095861.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010095861.10.0transcription factor MYB14
TrEMBLW9RAQ00.0W9RAQ0_9ROSA; Myb-related protein Myb4
STRINGXP_010095861.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF35633186
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.17e-61myb domain protein 14