PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010096464.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 335aa    MW: 37009.6 Da    PI: 6.9767
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010096464.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.84.3e-21158207255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrd +     + +r++lg+f+tae Aa+a+++a+++++g
  XP_010096464.1 158 KYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFDTAESAARAYDEAALRFRG 207
                     8********.**********66.....56*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.8E-33157216IPR001471AP2/ERF domain
PROSITE profilePS5103225.541158215IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-23158216IPR016177DNA-binding domain
PfamPF008471.2E-14158207IPR001471AP2/ERF domain
SMARTSM003803.6E-36158221IPR001471AP2/ERF domain
CDDcd000184.78E-36158217No hitNo description
PRINTSPR003676.4E-12159170IPR001471AP2/ERF domain
PRINTSPR003676.4E-12181197IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006970Biological Processresponse to osmotic stress
GO:0009749Biological Processresponse to glucose
GO:0009788Biological Processnegative regulation of abscisic acid-activated signaling pathway
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MNAMVSALSR VVSGNLPKNS YSADHQVSDF SGSVNSSDFL GSNFVGIKRG RDQDEDFRVF  60
GDHQVSSNRV SSSSLLGGDN MQIKLHDLRL TIFISHNIEQ TTEGSNNTWT AATATAMVEN  120
TMSSSTIFPT QTMSFTPTYE YHDMSPQQQQ EQTTRPRKYR GVRQRPWGKW AAEIRDPFKA  180
ARVWLGTFDT AESAARAYDE AALRFRGNKA KLNFPENVRI RPPPVNSPAT HVAVSNSSNT  240
LLSISTTSNP IVHSQSLQSS STTMPLQYSS YNSQFVGSET GTMSLYDQMF SSPPMVDMPF  300
SSSATPESST SNYSDFSEQQ QWTGSSHYNT KNSSG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-24157218163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00584DAPTransfer from AT5G64750Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010096464.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024021449.10.0ethylene-responsive transcription factor ABR1
TrEMBLW9RA190.0W9RA19_9ROSA; Ethylene-responsive transcription factor
STRINGXP_010096464.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49333254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.17e-29ethylene response factor 110