PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010097075.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB_related
Protein Properties Length: 307aa    MW: 33653.6 Da    PI: 10.4048
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010097075.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.18.4e-13129173347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +W+ eE+ +++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky
   XP_010097075.1 129 PWSDEEHRIFLIGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKY 173
                      8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501588.911318IPR001878Zinc finger, CCHC-type
PROSITE profilePS5129417.774122178IPR017930Myb domain
SuperFamilySSF466894.04E-17123178IPR009057Homeodomain-like
TIGRFAMsTIGR015573.7E-17125177IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.4E-10126172IPR009057Homeodomain-like
SMARTSM007172.5E-9126176IPR001005SANT/Myb domain
CDDcd001672.86E-8129174No hitNo description
PfamPF002494.8E-10129173IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MGRKCSHCGK MGHNSRTCNS RRRLVSGCRF RLFGVQLDQY YPSSSSSSPS SSQISSFSNH  60
AMNTKKSLSI DCLSSSSTPS SSSSSRISNS TTSHSTVHHE EISDHKLLSN GYLSDGFIAG  120
AQERKKGVPW SDEEHRIFLI GLEKLGKGDW RGISRNFVTT RTPTQVASHA QKYFLRQNTL  180
NKRKRRSSLF DVVTDQLSLQ VVNNVNISNP IIEPSTIGIA PFGFSAKANT AGPTSLLDVN  240
CSTSLDARKF GHISEWPMSI HQYRRAPLFN AESLHSHQPT SSSNTTKGAP DLELTLCSSN  300
GAVRATK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010097075.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010097075.10.0transcription factor KUA1 isoform X1
TrEMBLW9R3N70.0W9R3N7_9ROSA; Transcription factor
STRINGXP_010097075.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32133271
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.14e-51MYB_related family protein