PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010097386.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 183aa    MW: 20757.1 Da    PI: 10.0891
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010097386.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.000624365123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C+++Fs+   L  H  +H
  XP_010097386.1 43 FECKTCNRRFSSFQALGGHRASH 65
                    89**********99999998887 PP
2zf-C2H213.90.0001692114123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg +Fs    L  H+r+H
  XP_010097386.1  92 HECSICGVVFSMGQALGGHMRRH 114
                     78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576677.34E-842114No hitNo description
PfamPF139125.8E-124267IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.6994370IPR007087Zinc finger, C2H2
SMARTSM003550.164365IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002804565IPR007087Zinc finger, C2H2
PROSITE profilePS501579.53692119IPR007087Zinc finger, C2H2
PfamPF139128.5E-1292116IPR007087Zinc finger, C2H2
SMARTSM003550.07392114IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028094114IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0071289Biological Processcellular response to nickel ion
GO:2000280Biological Processregulation of root development
GO:0005634Cellular Componentnucleus
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MKRMREEEEK NYELDTAKYL MLLGSGLAVQ PIRQYRPPST DVFECKTCNR RFSSFQALGG  60
HRASHNKRRM TVDDHHESAK TSPAKSSLPK KHECSICGVV FSMGQALGGH MRRHKAIMEM  120
QGSFADIMPH HHHDVVVSKT PVVLKRSNSS VKVSWTLDLN LTPLENDLKI LFGKMAPKVD  180
LFI
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010097386.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010097386.11e-136zinc finger protein ZAT11
TrEMBLW9R4H91e-135W9R4H9_9ROSA; Zinc finger protein ZAT11
STRINGXP_010097386.11e-136(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31634175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.11e-43C2H2 family protein