PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010097568.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WOX
Protein Properties Length: 395aa    MW: 44704.8 Da    PI: 7.944
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010097568.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox68.77.5e-2284143357
                     --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     +R+++t+eql++Le+l+++ +r+psae++++++++l    +++ ++V++WFqN++a+e++
  XP_010097568.1  84 SRWNPTPEQLRALEDLYRRgTRTPSAEQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 143
                     7*****************99**************************************97 PP
2Wus_type_Homeobox114.74.5e-3783145365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ++RW+PtpeQ++ Le+ly++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+
     XP_010097568.1  83 SSRWNPTPEQLRALEDLYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 145
                        79***********************************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003891.7E-581148IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.9E-984143IPR009057Homeodomain-like
PfamPF000461.7E-1984143IPR001356Homeobox domain
SuperFamilySSF466898.55E-1384150IPR009057Homeodomain-like
CDDcd000862.19E-685145No hitNo description
PROSITE profilePS5007111.12789144IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048513Biological Processanimal organ development
GO:0099402Biological Processplant organ development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MWMMGYNDGA ELNLHDSFNS TTRKVRPLIP RPLPSTNNTP TSNPPCLSRI QGSADFFAQY  60
HHLATVAEQN KREFNTSPQV VVSSRWNPTP EQLRALEDLY RRGTRTPSAE QIQHITAQLR  120
RYGKIEGKNV FYWFQNHKAR ERQKRRRQME STPEDRELDM PEKNKELGAS RTVFEVEQTK  180
NWAPPTNCST LAEESHVSIQ RAAGAAKAGV VGQGAESCIR TDGWIQLGEG ELHLQHKRNN  240
FVERNATWQM MQLSCPHPHT SLPTNLPNIT NTTTTTTTTT RRSRTTASVI SSTMDQRLLK  300
TSTNDLSIFI TPAYRSENGL INNGYNYLSS SKVNSEEEDY NNNCSEESQT LELFPLRSGD  360
DNGSEKEGQI LSVSAMNAGV MTMPSQFFEF LPLKN
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010097568.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010097568.10.0WUSCHEL-related homeobox 1
TrEMBLW9RTE50.0W9RTE5_9ROSA; WUSCHEL-related homeobox 1
STRINGXP_010097568.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28923471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.16e-57WUSCHEL related homeobox 1