PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010097590.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB
Protein Properties Length: 1382aa    MW: 154575 Da    PI: 7.4824
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010097590.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding292.6e-09429473246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      ++WT++Ed+ l+ +v++ G  +W  Ia  +g++Rt+ qc  r+q 
   XP_010097590.1 429 NPWTAQEDKNLLILVQKKGISNWFDIAVSLGTNRTPFQCLTRYQR 473
                      58*****************************************96 PP
2Myb_DNA-binding32.91.5e-10482525246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                        WT++Ed +l  av+ +G g+W  +a+ +  g t+ qc +rw k
   XP_010097590.1 482 REWTKDEDAKLRSAVEAYGEGDWQFVASVLE-GWTGTQCSNRWKK 525
                      68*****************************.***********98 PP
3Myb_DNA-binding54.33.2e-17535578246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      grWT++Ed++l+ a  ++G+++Wk+Ia+ ++ gRt+ qc++rw +
   XP_010097590.1 535 GRWTPDEDKRLKVAQMLFGPRNWKKIAQFVP-GRTEVQCRERWVN 578
                      8******************************.***********87 PP
4Myb_DNA-binding46.39.5e-15587629246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g+WT+eEd +l +a  ++G   W+++a+ ++ +Rt+++c+ rw  
   XP_010097590.1 587 GKWTAEEDSKLREATVKHGHC-WSKVAAALP-RRTDNMCRRRWKR 629
                      79*****************99.*********.***********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500905.645323422IPR017877Myb-like domain
SMARTSM007170.0025327424IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.1E-8330346IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.1E-8395435IPR009057Homeodomain-like
SuperFamilySSF466891.34E-15404472IPR009057Homeodomain-like
PROSITE profilePS500908.931423475IPR017877Myb-like domain
SMARTSM007173.6E-7427477IPR001005SANT/Myb domain
CDDcd001672.10E-6430475No hitNo description
PfamPF139215.0E-10431486No hitNo description
Gene3DG3DSA:1.10.10.603.9E-11436483IPR009057Homeodomain-like
SuperFamilySSF466891.29E-17460530IPR009057Homeodomain-like
PROSITE profilePS5129419.075476531IPR017930Myb domain
SMARTSM007173.8E-13480529IPR001005SANT/Myb domain
CDDcd001677.28E-11483527No hitNo description
Gene3DG3DSA:1.10.10.601.3E-14484529IPR009057Homeodomain-like
SuperFamilySSF466892.01E-25533627IPR009057Homeodomain-like
SMARTSM007171.3E-15533582IPR001005SANT/Myb domain
PROSITE profilePS5129414.445533580IPR017930Myb domain
PfamPF002497.5E-16535578IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.0E-20535585IPR009057Homeodomain-like
CDDcd001671.13E-13536580No hitNo description
PROSITE profilePS5129421.804581635IPR017930Myb domain
SMARTSM007172.3E-12585633IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.609.4E-18586630IPR009057Homeodomain-like
PfamPF002491.7E-13587630IPR001005SANT/Myb domain
CDDcd001671.21E-11588630No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1382 aa     Download sequence    Send to blast
MAMSPKQEEE EEERELSGSE DDDVLDEDME ALRRACMITG TNPDDAAAAA AGGGSNSDED  60
ENADEDNDGE DLVLLQNIRN RFSIPSVASE PLSMKPLCTL PLSMSDEEGD DDFETLRAVQ  120
KRFAAYDNDA LKNFSEKQEQ VCCMSPQKKA SNDLVVDTFD VCKGLLDSQF ACQTTHLLDD  180
HLEEPPSTSI EWHQTDSSKP STSEPSYSSF PKSAKVFMDA IKKNRSFQKS LRSKLIQIEA  240
KIEENKKLKE RVKILKDFQI NCKRRTGRAL SQKKDSRVQL ISVKKSLPSK DSKVHEKKIP  300
AMYYGPIENS HVANYRIAST QLPLSLERKK WSEVEKKNLE KGIRQQFQET ALQIMLDQLS  360
GTGESSGNLN DLDNILLSIK HLDITPDNMR EFLPKVNWEQ LASMYVAGRS GAECEARWLN  420
FEDPLINCNP WTAQEDKNLL ILVQKKGISN WFDIAVSLGT NRTPFQCLTR YQRSLNVSIL  480
KREWTKDEDA KLRSAVEAYG EGDWQFVASV LEGWTGTQCS NRWKKSLHPT RERVGRWTPD  540
EDKRLKVAQM LFGPRNWKKI AQFVPGRTEV QCRERWVNSL DPSLNWGKWT AEEDSKLREA  600
TVKHGHCWSK VAAALPRRTD NMCRRRWKRL HPDEVHLLQA ARKMQKAALI CNFVDRESER  660
PALGLNDFCP LMITSGEKVN HCKEQSGKLR RGLISGKKRI KPSCKVTKNR RSKKSTENAQ  720
TGTEEGLEIN NHDEVETFDE PEATIEQGSE NNNSTKPGQD HPPSPQISSE NGKGLTGPDG  780
KRKKQSRKPR STRKEHTEPD EVRECLPLQP ESLNLTSNGD GIEPLAETNT TSTDTRGVSK  840
RKYSKNVRTT NLENNNLMKP GQDRPSSPQI SSENGKGLTG ANGKRMKQSR KPRSTRKEHT  900
DPVEVRELLP VQPESLNLTS NSDGIEPLAR TNTILTDTRR VSKRKCSREV SENNNLMKPG  960
QDCPLSPEIS SENGKGLIGP DSKRKKQSRK LRSTRQEDSA PAVRECLPFQ PESFNLTSNG  1020
DGIEPLAGTN TSLTNSRRVS KRKYSTNIST TNSEELQSTT AHSGKSLLTG TDDVKHQRNG  1080
SSCMDTTQLL MTNVEDVTLD GNTLCNGKKG TEPAGVFEDV LPVPPQDNEL QKVKPRTRGT  1140
SHSDQNFGRA DDEILLVRST SKKLKRRKLL VNDCQNKTSL SPSVIQESEL FPVVTLHDGN  1200
SVLSAMQDDE LTCCDGGTSE KLSACNRESS LLLEQCTAVP TENEPGSENL VGGQTVACEE  1260
LVKEMVSVDA QSGNNDDDTS LASLVQKKLK KERQTSKRGT RACLPSSLIR GSQLLSKRVN  1320
QLQDGDYTSS VPSGLDPLTG PEVAFDKQQR EEAEDDNVVG DMTLSCFVQN KSKKRRLQST  1380
DK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C6e-283976276155MYB PROTO-ONCOGENE PROTEIN
1h89_C6e-283976276155MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
110361042RRVSKRK
211611167KKLKRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010097590.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010097590.10.0uncharacterized protein LOC21400403 isoform X1
TrEMBLW9RFI80.0W9RFI8_9ROSA; Myb-like protein L
STRINGXP_010097590.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74413344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-179myb domain protein 4r1