PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010097681.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family B3
Protein Properties Length: 153aa    MW: 17094.3 Da    PI: 4.9736
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010097681.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.11.8e-14681263796
                     EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                      + +  g++W+++++ ++ s++  l + W++Fv++n+Lk gD +vF+ld++s+++lv++v
  XP_010097681.1  68 AVLTYGGKEWNLTYRGSNASCK-KLDGSWQNFVDDNNLKIGDACVFELDESSCKKLVFRV 126
                     567779********77666666.69************************99999999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.106.2E-1630130IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.73E-1731129IPR015300DNA-binding pseudobarrel domain
CDDcd100176.69E-1634130No hitNo description
PROSITE profilePS5086312.04136132IPR003340B3 DNA binding domain
SMARTSM010193.8E-636132IPR003340B3 DNA binding domain
PfamPF023624.3E-1268126IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MEQDSHSAFN TSPVSNTEHD LESEEFWTLS GKKPFFDIIL TKSHINPRYL LTLPAKIQPV  60
LPSLATPAVL TYGGKEWNLT YRGSNASCKK LDGSWQNFVD DNNLKIGDAC VFELDESSCK  120
KLVFRVQILR GDIPPELHSK IVGESSDSPI VIE
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010097681.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010097681.11e-111B3 domain-containing protein Os04g0386900
TrEMBLW9RFQ01e-109W9RFQ0_9ROSA; B3 domain-containing protein
STRINGXP_010097681.11e-110(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97222640
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-10B3 family protein