PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010097869.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 368aa    MW: 41268 Da    PI: 4.5246
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010097869.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-19123172255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ kl+g
  XP_010097869.1 123 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 172
                     89*******.**********82....35*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.0E-29122180IPR001471AP2/ERF domain
SMARTSM003807.4E-38123186IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-21123180IPR016177DNA-binding domain
CDDcd000184.52E-33123179No hitNo description
PROSITE profilePS5103223.63123180IPR001471AP2/ERF domain
PfamPF008479.9E-13123172IPR001471AP2/ERF domain
PRINTSPR003674.2E-10124135IPR001471AP2/ERF domain
PRINTSPR003674.2E-10146162IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042991Biological Processtranscription factor import into nucleus
GO:0048366Biological Processleaf development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MEQSILCPIK YTEHRSVTKK VRKQSRKSLC SPSSSSSAEF SPAVPRVVRI SVMDPYATDS  60
SDDEEDEGEF IFSRQRVKRY VNEIKIETSC KPRIAAVNAR KRPAVEAPAH RRPIKTTTTN  120
GRKFRGVRQR PWGKWAAEIR DPARRVRLWL GTYDTAEEAA MVYDNAAIKL RGPDALTNFV  180
TPFQKDQNPE LPEENKASSA SASVSGYDSG DESRNLSSPT SVLHFRTHST EEAEAPQKPV  240
EPLEAEVCQP LLLKAPKQVM IVEECQGETS IADDLGEYWP LDFPSFDDDV FKFESPESET  300
LFEPSFLFDE NDDVSAITSL PESVLKEDFS DMFLDSFETS SPPLPSAAWQ GDDLFQDILF  360
GSDPLVVL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-21121179362ATERF1
3gcc_A8e-21121179362ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00456DAPTransfer from AT4G27950Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010097869.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010097869.20.0ethylene-responsive transcription factor CRF4
TrEMBLW9R5J70.0W9R5J7_9ROSA; Ethylene-responsive transcription factor CRF4
STRINGXP_010097869.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45034161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-54cytokinin response factor 4