PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010098424.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

bZIP

Protein Properties

Length: 353aa MW: 39691 Da PI: 6.553

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010098424.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.2	2.8e-11	208	253	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe v +L++e +aL ++ XP_010098424.1 208 KRVKRILANRQSAQRSRVRKLQYISELEHSVTALQSEVSALSPRVA 253 8999*********************************999987765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.0E-13	204	268	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.645	206	258	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.64E-12	208	262	No hit	No description
Pfam	PF00170	1.3E-9	208	252	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.1E-13	208	259	No hit	No description
CDD	cd14703	5.98E-23	209	259	No hit	No description
PROSITE pattern	PS00036	0	211	226	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence Send to blast
MAELPPKIPN MTQNWSNAFL PHQRMDTFIT TTAQQQQQQH HHHQHQQPCW VDEFLDFASA 60 RRGAHRRSVS DSIAFLESPV VIMEDQDQEQ EGRRHHNNNN NNNIMHGFER LDDEQLIMSM 120 FSDDMSLSAA AGAVAGEGAP PAVSSSNPST PSDQNSNNDG IKPTMALHQP HDQQPKTEPG 180 EVESPCEGDP HAPPPPQPLS TDSIIDPKRV KRILANRQSA QRSRVRKLQY ISELEHSVTA 240 LQSEVSALSP RVAFLDHQRL ILNVDNSALK QRIAALAQDK IFKDAHQEAL KKEIERLRQV 300 YHQQNLKKKN MQQQQQEGIN QNSHPPPPST DQQNSDIALA TTCTGKEQIS IHS

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence Send to blast

MAELPPKIPN MTQNWSNAFL PHQRMDTFIT TTAQQQQQQH HHHQHQQPCW VDEFLDFASA  60
RRGAHRRSVS DSIAFLESPV VIMEDQDQEQ EGRRHHNNNN NNNIMHGFER LDDEQLIMSM  120
FSDDMSLSAA AGAVAGEGAP PAVSSSNPST PSDQNSNNDG IKPTMALHQP HDQQPKTEPG  180
EVESPCEGDP HAPPPPQPLS TDSIIDPKRV KRILANRQSA QRSRVRKLQY ISELEHSVTA  240
LQSEVSALSP RVAFLDHQRL ILNVDNSALK QRIAALAQDK IFKDAHQEAL KKEIERLRQV  300
YHQQNLKKKN MQQQQQEGIN QNSHPPPPST DQQNSDIALA TTCTGKEQIS IHS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator involved in the sporophytic control of cell wall patterning and gametophytic control of pollen development. May play a role in the control of metabolic pathways regulating cellular transport and lipid metabolism. {ECO:0000269\|PubMed:17719007, ECO:0000269\|PubMed:19449183}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010098424.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KP229674	1e-102	KP229674.1 UNVERIFIED: Boehmeria nivea Basic leucine zipper transcription factor-like (bZIP08) mRNA, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010098424.1	0.0	basic leucine zipper 34
Swissprot	F4IN23	3e-92	BZP34_ARATH; Basic leucine zipper 34
TrEMBL	W9RFD2	0.0	W9RFD2_9ROSA; Transcription factor RF2b
STRING	XP_010098424.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2011	34	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	2e-90	bZIP family protein

Link Out ? help Back to Top
Entrez Gene	21395368

Publications ? help Back to Top
Jiang J,Zhang Z,Cao J Pollen wall development: the associated enzymes and metabolic pathways. Plant Biol (Stuttg), 2013. 15(2): p. 249-63 [PMID:23252839] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]