PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010098449.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

FAR1

Protein Properties

Length: 230aa MW: 26390.2 Da PI: 8.3598

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010098449.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.2	2e-26	65	153	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA+++GF +r+ + ++s+r+g+i r++ C+keg+ + + k r++r++tr gCka+++vk +k+gkw++tk++++HnH+l+ XP_010098449.1 65 FYDEYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGPVRKPRPSTREGCKAMIHVKYDKSGKWVITKFVKDHNHPLV 153 9************************************99999998**************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.6E-24	65	153	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence Send to blast
MPEVMVPPSG LPKFATKWEQ EVDSDEGAGA VESSAVHPLV PYEGDTILEP CEGMEFDSED 60 AAKIFYDEYA RRLGFVMRVM SCRRSERDGR ILARRLGCNK EGYCVSIRGK FGPVRKPRPS 120 TREGCKAMIH VKYDKSGKWV ITKFVKDHNH PLVVSTREAR QTMDEKDKKI QELTVELRNK 180 KRLCSTYQEQ LTAFIKIVEE HSDQLSKKVQ NVVSNLKEIE PIDQDLSQRR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010098449.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010098449.1	1e-172	protein FAR-RED IMPAIRED RESPONSE 1 isoform X1
Refseq	XP_024022740.1	1e-172	protein FAR-RED IMPAIRED RESPONSE 1 isoform X1
Refseq	XP_024022742.1	1e-172	protein FAR-RED IMPAIRED RESPONSE 1 isoform X1
TrEMBL	W9RFJ0	1e-171	W9RFJ0_9ROSA; Uncharacterized protein
STRING	XP_010098449.1	1e-171	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF965	31	104

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	1e-110	FAR1 family protein

Link Out ? help Back to Top
Entrez Gene	21395393