PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010098457.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C3H
Protein Properties Length: 194aa    MW: 21837.8 Da    PI: 7.7234
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010098457.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.44.3e-074164327
                    S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH  3 telCrffartGtCkyGdrCkFaHgp 27
                      lC+f+a  G C  G+rC+++H++
  XP_010098457.1 41 DTLCKFWAT-GRCFKGNRCPYMHSQ 64
                    579******.*************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.1000.105.2E-63765IPR000571Zinc finger, CCCH-type
SMARTSM003565.3E-53864IPR000571Zinc finger, CCCH-type
SuperFamilySSF902297.06E-83963IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010315.0753965IPR000571Zinc finger, CCCH-type
PfamPF006421.5E-44164IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MGFLPNGRGG GEGRGRRPTN NVWVRLGGPT KERNQNDVRK DTLCKFWATG RCFKGNRCPY  60
MHSQSHDTKI AHSSERDKLK SDDNKKEMPI CKLIAPLQRH TGFNVCEQAD TDIAYPPAGD  120
EPKTDNNMEM LCNVSIIATL QGHTKPEVPD PKIGCARIAR PEARIFEFFE FCPNFSRLPD  180
LPDPPEVPEL PEYG
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010098457.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLW9R7J21e-143W9R7J2_9ROSA; Uncharacterized protein
STRINGXP_010098457.11e-144(Morus notabilis)