PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010098585.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 199aa    MW: 22506 Da    PI: 6.1406
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010098585.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.82.6e-103781655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     e+ErrRR ++ +++  Lr ++P+      + + Ka+i+e Av +Ik+Lq
  XP_010098585.1 37 LEAERRRRGKLHDRLMALRGVVPQI-----TNMKKATIVEDAVAHIKMLQ 81
                    589*********************6.....5799***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.88E-102384No hitNo description
SuperFamilySSF474595.37E-132990IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.2873180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.7E-83781IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.2E-103786IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.6E-123890IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048658Biological Processanther wall tapetum development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MDQFIGSAMN ELFISERGRI GHKRRTNRNG PCTSKNLEAE RRRRGKLHDR LMALRGVVPQ  60
ITNMKKATIV EDAVAHIKML QQTVVHLKDQ LWDEVASPEE GIELKNEEFC AAEEMNSLGI  120
QPDITVIQMY ENKFWIKAIF AKKRGGFTEF MDAVTAFGFE LTDTSLTTIN GAMLVTSCLE  180
GVSCEKLSVE EIKQVLLEI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12243KRRTNRNGPCTSKNLEAERRRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00091SELEXTransfer from AT4G21330Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010098585.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024022847.11e-139LOW QUALITY PROTEIN: transcription factor DYT1
TrEMBLW9RIA61e-146W9RIA6_9ROSA; Uncharacterized protein
STRINGXP_010098585.11e-146(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55102948
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.11e-39bHLH family protein