PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010098637.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family HD-ZIP
Protein Properties Length: 351aa    MW: 39913.2 Da    PI: 4.6568
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010098637.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox642.2e-20102155356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k+++++++q+++Le++Fe ++++  e++++LA++lgL+ rqV +WFqNrRa++k
  XP_010098637.1 102 KKRRLSSDQVKALEKYFEVENKLEPERKAKLADELGLQPRQVAIWFQNRRARWK 155
                     45689************************************************9 PP
2HD-ZIP_I/II127.94.3e-41102193293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     kkrrls++qvk+LE+ Fe e+kLeperK++la eLglqprqva+WFqnrRAR+ktkqlEkdy+ Lk++yd+lk + e+L++++e+L +++++
  XP_010098637.1 102 KKRRLSSDQVKALEKYFEVENKLEPERKAKLADELGLQPRQVAIWFQNRRARWKTKQLEKDYTLLKANYDSLKLSYENLQQQNEALSKQVAQ 193
                     9**************************************************************************************99976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007117.58997157IPR001356Homeobox domain
SuperFamilySSF466893.72E-1998159IPR009057Homeodomain-like
SMARTSM003898.2E-20100161IPR001356Homeobox domain
PfamPF000461.2E-17102155IPR001356Homeobox domain
CDDcd000861.91E-16102158No hitNo description
Gene3DG3DSA:1.10.10.609.5E-21104164IPR009057Homeodomain-like
PRINTSPR000318.4E-6128137IPR000047Helix-turn-helix motif
PROSITE patternPS000270132155IPR017970Homeobox, conserved site
PRINTSPR000318.4E-6137153IPR000047Helix-turn-helix motif
PfamPF021832.8E-15157197IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MQTESHKEIL RQGPLLRSDL LCGSPGRSSW STPLEEEEEE EPKKEVMKRF SSPDSLGALV  60
PICPQKDSEE KYKETERGYS KEFQAMLDTL DQDDCAEEFT GKKRRLSSDQ VKALEKYFEV  120
ENKLEPERKA KLADELGLQP RQVAIWFQNR RARWKTKQLE KDYTLLKANY DSLKLSYENL  180
QQQNEALSKQ VAQLKGRVCR ESSESSESVK EESPVSDHTK KSDSQENSTE QKAGLEVEGY  240
GNLKPKLSDG SSDSDSNVVD VVTREDHCGE LKFSLGLNGM SSSSSSSSSS LMANWFQLSD  300
SRANFPVKMC QPQFMKVEDQ YTSLFGSEDQ SCNSFFSVDQ APTLYWYLPE Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149157RRARWKTKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010098637.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024022887.10.0homeobox-leucine zipper protein ATHB-6 isoform X1
RefseqXP_024022888.10.0homeobox-leucine zipper protein ATHB-6 isoform X1
TrEMBLW9RIE20.0W9RIE2_9ROSA; Homeobox-leucine zipper protein ATHB-16
STRINGXP_010098637.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18683489
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G40060.13e-50homeobox protein 16