PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010098722.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB
Protein Properties Length: 240aa    MW: 26303.1 Da    PI: 8.7186
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010098722.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.71.5e-194893147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W+teEd++l ++v+++G+++W++I+r++  gR++k+c++rw + 
   XP_010098722.1 48 KGPWSTEEDQILTRLVERYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 93
                     79*****************************9.***********985 PP
2Myb_DNA-binding52.41.3e-16102144347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +++  Ede +  a++++G++ W+tIar ++ gRt++ +k++w++ 
   XP_010098722.1 102 PFSSAEDETIMAAHARYGNR-WATIARLLP-GRTDNAVKNHWNST 144
                      7999****************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129427.2144398IPR017930Myb domain
SuperFamilySSF466891.73E-3145141IPR009057Homeodomain-like
SMARTSM007171.2E-164796IPR001005SANT/Myb domain
PfamPF002492.3E-184893IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.3E-2449101IPR009057Homeodomain-like
CDDcd001675.94E-165092No hitNo description
SMARTSM007171.9E-1399147IPR001005SANT/Myb domain
PROSITE profilePS5129419.995100149IPR017930Myb domain
CDDcd001674.41E-11102145No hitNo description
Gene3DG3DSA:1.10.10.605.6E-22102148IPR009057Homeodomain-like
PfamPF002491.7E-13102144IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MNNNNINNYY MTTRPCSSSA SSTSDSSSSD QSTPTRGNNS GPKPDRIKGP WSTEEDQILT  60
RLVERYGPRN WSLISRYIKG RSGKSCRLRW CNQLSPTVEH RPFSSAEDET IMAAHARYGN  120
RWATIARLLP GRTDNAVKNH WNSTLKRRAV GDAYSPQNSN LEGGCCGIGG ASTSAGPVLP  180
EEDPLTALTL APPGIMAAER RTESVPDGFW DVMKGVIARE VREYVSSAFS DNISGFHSNS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C8e-434414954159MYB PROTO-ONCOGENE PROTEIN
1h89_C8e-434414954159MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010098722.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010098722.11e-178transcription factor MYB73
RefseqXP_010113113.11e-178transcription factor MYB73
SwissprotO231601e-58MYB73_ARATH; Transcription factor MYB73
TrEMBLW9RIK81e-177W9RIK8_9ROSA; Transcription factor
STRINGXP_010098722.11e-178(Morus notabilis)
STRINGXP_010113113.11e-178(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50743256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.15e-60myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]