PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010099089.1
Common NameDREB5H
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 211aa    MW: 23733.4 Da    PI: 4.5234
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010099089.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.4e-192171155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr +k +g+Wv+eIr p++   r r++lg+++tae+Aa+a +aa  +l+g
  XP_010099089.1 21 CRYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDTAEKAARAFDAALFCLRG 71
                    78*****999.**********933...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.1E-112171IPR001471AP2/ERF domain
CDDcd000184.24E-302181No hitNo description
PROSITE profilePS5103222.5632279IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.3E-302280IPR001471AP2/ERF domain
SMARTSM003804.4E-342285IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-212280IPR016177DNA-binding domain
PRINTSPR003674.5E-102334IPR001471AP2/ERF domain
PRINTSPR003674.5E-104561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MVKQTSSEIP TAEERERRDS CRYKGVRKRK WGKWVSEIRL PNSRERIWLG SYDTAEKAAR  60
AFDAALFCLR GRTAKFNFPE NPPEIAGGRS LSPAEIQSAA ARFANSEDPM KRSDRPVPEL  120
RMESETPSPS PSVSEGSVTV QLDSELTTDG SFMDMFTNIG LGNYASDYGL FPGFDDLSGD  180
FFMPPPPTID YGEENYNVDA VFPQESFLWN F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-1619801173Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12329KGVRKRK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00151DAPTransfer from AT1G19210Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010099089.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6783860.0KF678386.1 Morus notabilis dehydration responsive element binding transcription factor (DREB5H) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010099089.11e-154ethylene-responsive transcription factor ERF017
SwissprotQ84QC23e-62ERF17_ARATH; Ethylene-responsive transcription factor ERF017
TrEMBLW6FFV71e-153W6FFV7_9ROSA; Dehydration responsive element binding transcription factor
STRINGXP_010099089.11e-154(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14793399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.16e-62ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Li SJ, et al.
    The Citrus transcription factor, CitERF13, regulates citric acid accumulation via a protein-protein interaction with the vacuolar proton pump, CitVHA-c4.
    Sci Rep, 2016. 6: p. 20151
    [PMID:26837571]
  3. Yin XR, et al.
    Involvement of an ethylene response factor in chlorophyll degradation during citrus fruit degreening.
    Plant J., 2016. 86(5): p. 403-12
    [PMID:27037684]