PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010099580.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 430aa    MW: 48512 Da    PI: 4.3151
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010099580.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.72.1e-102978250
             NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kk 50
                    ppG+rF P+deel+++yL +k +++ +e + +i+e+ + ++ P+++  + 
  XP_010099580.1 29 PPGYRFAPSDEELIMYYLIPKSQDQIFEPNCIISEITLSDYTPEEIAeTD 78
                    9*************************999788*************97333 PP
2NAM67.63.6e-211002102128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                     ppG+rF P+deel+++yL +k +++ +e + +i+e+ + ++ P+++                  +k+++gkr+nr + +gyW+   ++++v+s +
  XP_010099580.1 100 PPGYRFAPSDEELIMYYLIPKSQDQIFEPNCIISEITLSDYTPEEIA----------------VRKSNNGKRRNRLAGDGYWRLA-NTTDVYSDN 177
                     9*************************999788**************6................3566799******9*****976.55899999* PP

             NAM  97 gelvglkktLvfykg.rapkgektdWvmheyrl 128
                     g ++g k  L f++   + k ektdW+mhe+++
  XP_010099580.1 178 GVKIGSKSLLGFHRViPNVKEEKTDWIMHEFSV 210
                     *************876778889*********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.05E-102287IPR003441NAC domain
PfamPF023654.3E-52957IPR003441NAC domain
SuperFamilySSF1019414.84E-2693243IPR003441NAC domain
PROSITE profilePS5100524.69299243IPR003441NAC domain
PfamPF023651.3E-14100209IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MEVSETDHNY DQMEGYRVEE TAVLNYYCPP GYRFAPSDEE LIMYYLIPKS QDQIFEPNCI  60
ISEITLSDYT PEEIAETDFN YDQMEGYRVE ETAVLNYYCP PGYRFAPSDE ELIMYYLIPK  120
SQDQIFEPNC IISEITLSDY TPEEIAVRKS NNGKRRNRLA GDGYWRLANT TDVYSDNGVK  180
IGSKSLLGFH RVIPNVKEEK TDWIMHEFSV LPSLDRKRKL TTLGEEDMLK LEDGYVLCQM  240
YKRGSTKTNK VLRRSNKNTE LQILPHNYVE TAPANLEYHA HDDHDQNSML LSKTPGRIDH  300
GALTLVETPP STSVSGENRN LGGLSSDAIL GAVPPTAAAD DGDELTAFLL KALDAEDYYY  360
AQLMENSLPT TATTSSSNIT DVSPQKANDK DLVLRGLEEV NQLISDFSNH ISTPIAPNWD  420
TATTSTTCCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-1810024618168NO APICAL MERISTEM PROTEIN
1ut4_B2e-1810024618168NO APICAL MERISTEM PROTEIN
1ut7_A2e-1810024618168NO APICAL MERISTEM PROTEIN
1ut7_B2e-1810024618168NO APICAL MERISTEM PROTEIN
4dul_A2e-1810024618168NAC domain-containing protein 19
4dul_B2e-1810024618168NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010099580.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010099580.10.0NAC transcription factor 56
TrEMBLW9RKV40.0W9RKV4_9ROSA; NAC domain-containing protein 19
STRINGXP_010099580.10.0(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.13e-22NAC domain containing protein 25