PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010099609.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 263aa    MW: 28275.3 Da    PI: 8.3967
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010099609.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.0003100122123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ykC+ C+k F++   L  H  +H
  XP_010099609.1 100 YKCSVCNKAFPSYQALGGHKASH 122
                     9***********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.29E-9100122No hitNo description
PfamPF139126.6E-14100124IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.325100127IPR007087Zinc finger, C2H2
SMARTSM003550.0057100122IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280102122IPR007087Zinc finger, C2H2
SuperFamilySSF576671.29E-9152179No hitNo description
PfamPF139121.6E-13156181IPR007087Zinc finger, C2H2
PROSITE profilePS501579.328157179IPR007087Zinc finger, C2H2
SMARTSM003550.18157179IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280159179IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006979Biological Processresponse to oxidative stress
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009611Biological Processresponse to wounding
GO:0009644Biological Processresponse to high light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0010117Biological Processphotoprotection
GO:0010200Biological Processresponse to chitin
GO:0015979Biological Processphotosynthesis
GO:0035264Biological Processmulticellular organism growth
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MALEALNSPT TTTPFPFDHH QEAESLHSFH EPWIKRKRSR RPPPRLDQDP PPSEEEYLAL  60
CLIMLARGTT GTTDTTNTTS SSSSGRLTPP PPPPALKLSY KCSVCNKAFP SYQALGGHKA  120
SHRKSSSEGP TSAARGTDNH PSTSAASSAS AGGVRTHECS ICHKTFPTGQ ALGGHKRCHY  180
DGGNNGAERV TSSEGGASSH SQSQSQRGFD LNLPALPEFW PGFDRVSDKK SQLFGEQEVE  240
SPLPAKKPRL SIHKDNVAAL VQD
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00162DAPTransfer from AT1G27730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010099609.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010099609.10.0zinc finger protein ZAT10
TrEMBLW9RIP00.0W9RIP0_9ROSA; Zinc finger protein ZAT10
STRINGXP_010099609.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13273291
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.13e-41salt tolerance zinc finger