PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010099675.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB_related
Protein Properties Length: 447aa    MW: 49345 Da    PI: 7.9443
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010099675.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.41.2e-163983147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+eE++++++a k++G g W+ I +++g ++++ q++s+ qk+
   XP_010099675.1 39 REKWTEEEHQKFLEALKLYGRG-WRQIEEHVG-TKSAVQIRSHAQKF 83
                     789*******************.*********.************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.42E-153486IPR009057Homeodomain-like
PROSITE profilePS5129421.3633488IPR017930Myb domain
TIGRFAMsTIGR015571.3E-153786IPR006447Myb domain, plants
SMARTSM007175.1E-133886IPR001005SANT/Myb domain
PfamPF002491.3E-143982IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.6E-93979IPR009057Homeodomain-like
CDDcd001674.00E-114184No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MELKTSVVGD ARCESDNQTI KMYDSPPKVR KAYRITKQRE KWTEEEHQKF LEALKLYGRG  60
WRQIEEHVGT KSAVQIRSHA QKFFSKVVRG STGSVESSIK PIEIPPPRPK RKPMHPYPRK  120
SAESLNLTPV SIQPERSPSP NLSAADKGTK SPTSVLSCQG SDALSSAASG QHNRSPLSAS  180
CTTDMRSISQ SPTEIENDYM IGNLPDEERR SSPAKLLSSS STLENLLSMK FELGAKDASY  240
TKEEEEEAEV AASGSFKLFG RTVLLSGFQK ESPSGAKNSQ TSKNDEGLVL TLSSDQLDTN  300
LSLGGAVSIW NQLEQPKESC NTETANSPML WWTLYQFPFH YLAACNQTLD QTPRNSCSEH  360
REEDKDIPKE RSSTGSNDGS ASGVETAGDK NLEAVDSFPQ KPCTKVSVEP SNSRKGFVPY  420
KRCLAERDNA SAVVAPNDRE RRKTRVC
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010099675.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010099675.20.0protein REVEILLE 1
TrEMBLW9RL290.0W9RL29_9ROSA; Myb-like protein G
STRINGXP_010099675.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF73133244
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18330.12e-42MYB_related family protein