PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010099959.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 146aa    MW: 16085.7 Da    PI: 7.739
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010099959.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.79e-054062123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C + F ++  L  H++ H
  XP_010099959.1 40 FSCNYCQRKFYSSQALGGHQNAH 62
                    89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.08E-63767No hitNo description
Gene3DG3DSA:3.30.160.609.2E-44079IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.0944067IPR007087Zinc finger, C2H2
PROSITE patternPS0002804262IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MDFQPNTSLH LSPPTNQLNL DLVLDPSSSP SSPSEPTKVF SCNYCQRKFY SSQALGGHQN  60
AHKLERTLAK KSRELTSVVV RAQSTGGGPS HSPVGLGQAR GWVEHDQGFY DHGRFGSWSS  120
NGYRVDHQNG VHQEDINAQI DLSLRL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in the regulation of floral organ abscission. Participates in processes that directly or indirectly influence shedding of floral organs. {ECO:0000269|PubMed:18192438}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010099959.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010099959.11e-106zinc finger protein 2
SwissprotQ392615e-33ZFP2_ARATH; Zinc finger protein 2
TrEMBLW9S0B31e-104W9S0B3_9ROSA; Zinc finger protein 2
STRINGXP_010099959.11e-105(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF96192334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.18e-34zinc finger protein 2