PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010100033.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family Trihelix
Protein Properties Length: 345aa    MW: 37298.5 Da    PI: 5.5723
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010100033.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix83.82.2e-2649145185
        trihelix   1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcpyfd 83 
                     rWt+qe+l+Li+++r  e+++rr +           + +p+W++vs+++r +g++r+p+qC+++w+nl+++ykkike+e+ r+ ++s s +++ +
  XP_010100033.1  49 RWTRQEILVLIQGKRVAESKVRRIRtaggaafgsgqAVEPKWASVSSYCRMHGVNRGPVQCRKRWSNLAGDYKKIKEWESLRKnDPSDSFWAMRN 143
                     8*****************99998433344455555488*******************************************95255556677776 PP

        trihelix  84 ql 85 
                     +l
  XP_010100033.1 144 DL 145
                     66 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.30749117IPR017877Myb-like domain
PfamPF138371.6E-1149141No hitNo description
Gene3DG3DSA:1.10.10.604.1E-549116IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050777Biological Processnegative regulation of immune response
GO:0071219Biological Processcellular response to molecule of bacterial origin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MALVQATSIP ASANTVDGET NGAVTVLPVP PSTDGAGGDD GSRAPRLPRW TRQEILVLIQ  60
GKRVAESKVR RIRTAGGAAF GSGQAVEPKW ASVSSYCRMH GVNRGPVQCR KRWSNLAGDY  120
KKIKEWESLR KNDPSDSFWA MRNDLRRERK LPGFFDKEVY DILDSGANQP VASGAEAETP  180
VPVPAAEEEE TGVMFDSGRG ATAEDGMFSD FEQEESGRSP EKEAQPPPAV AKEVARVPVG  240
IPATPISGAA AAESEKQPAT NPDTGATSQE GRKRKRSAFD ADEETSLQNQ LIDVLERNGK  300
AMAAHLEAQN THFQLDREQR KSHSDSLVAV INKLADALVR ISEKL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00288DAPTransfer from AT2G33550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010100033.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010100033.10.0trihelix transcription factor ASR3 isoform X2
SwissprotQ8VZ201e-107ASR3_ARATH; Trihelix transcription factor ASR3
TrEMBLW9RBU90.0W9RBU9_9ROSA; Uncharacterized protein
STRINGXP_010100033.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21653375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-108Trihelix family protein
Publications ? help Back to Top
  1. Vidal EA, et al.
    Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots.
    BMC Genomics, 2013. 14: p. 701
    [PMID:24119003]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]