PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010100211.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family GRF
Protein Properties Length: 486aa    MW: 53580.9 Da    PI: 7.3044
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010100211.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC77.71.1e-24220264145
             WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                     d+ep+rCrRtDGKkWRCsr+v++++k+CErH h++r rsrk++e+
  XP_010100211.1 220 DPEPWRCRRTDGKKWRCSRNVVPDQKYCERHSHKSRPRSRKPVEQ 264
                     79***************************************9985 PP
2QLQ54.82.9e-19158193237
             QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 
                     +FTaaQ q+L++Q ++yKy++a++PvPp+Ll +i+k
  XP_010100211.1 158 NFTAAQRQELERQTMIYKYMMASVPVPPQLLIPISK 193
                     7********************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009511.5E-10157193IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166621.373158193IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088802.1E-13159191IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.862220264IPR014977WRC domain
PfamPF088792.2E-20221263IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0009941Cellular Componentchloroplast envelope
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    Send to blast
MGTRIGFVAS EKGAVEKECD VGLGLRMQTT SNKSSSFSHK KITTTMMDTP HHHHHHHHHH  60
NHDDNNDDDE PTLLSASGGF GEEHGCVGGD ACSGPLLSTT TTTNNHHQAH VVASMSDIYD  120
VVGSTDFMPL PCSAETLISH NSSGVMVNAN VRGVVVPNFT AAQRQELERQ TMIYKYMMAS  180
VPVPPQLLIP ISKTTPNFPH LHSNTRSKGS LELGVPNTSD PEPWRCRRTD GKKWRCSRNV  240
VPDQKYCERH SHKSRPRSRK PVEQLHSHFF TTTTTTTTNN NNNNNGNNNT TLSYLKSSGL  300
LNQREKHPSL YSSTSHDQTR GLEWFMKGEE ANSSNQQGSF FTRPQSERAF DFYNNNNYQS  360
LQSQGLNEQF SSLIDPKLVP GQTRHFIDAW STNDKVLPYS SLSLSMQGGN NGTTSEDSEN  420
SQMGFGVEGD NLKSQIWLNN TISWNGSIST SPQQPQPQPG GPLAEALCLG MAGSARPTTT  480
SSRSSS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010100211.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010100211.10.0growth-regulating factor 8 isoform X1
TrEMBLW9RMK60.0W9RMK6_9ROSA; Uncharacterized protein
STRINGXP_010100211.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF138941621
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24150.11e-31growth-regulating factor 8