PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010100577.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 345aa    MW: 38295 Da    PI: 9.3632
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010100577.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.51.3e-53151421128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelvv+yLk+k+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++
  XP_010100577.1  15 LPPGFRFHPTDEELVVHYLKRKASSVPLPV-TIIAEVDLYKFDPWELPSKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTS 108
                     79****************************.89***************988899**************************************998 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++++vg+kk Lvfy g+ pkg kt+W+mheyrl
  XP_010100577.1 109 nGTQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142
                     67788***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-6410177IPR003441NAC domain
PROSITE profilePS5100561.72715177IPR003441NAC domain
PfamPF023654.1E-2816142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MESTDSSSGS QHPQLPPGFR FHPTDEELVV HYLKRKASSV PLPVTIIAEV DLYKFDPWEL  60
PSKASFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSNG TQKVGVKKAL  120
VFYGGKPPKG IKTNWIMHEY RLVDNITKPK LPDHHTSTDK KASLRLDDWV LCRIYKKNNA  180
QRPMMDHDKE DSMDALLMQS TTMQTTQNIS IIPKLPTPKP SNYTALLEND ESFFDGLLSS  240
ADHHHSSSIN NNKNNVLAVK RLPPSPFWHE AGAGPPVVGP GSAKRFHGDL NSGTSTGGGG  300
TDSEINNNSF VSILSQIPQN NTTPFHPNGV LLGSQFQLPT MNWSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-741518020171NAC domain-containing protein 19
3swm_B2e-741518020171NAC domain-containing protein 19
3swm_C2e-741518020171NAC domain-containing protein 19
3swm_D2e-741518020171NAC domain-containing protein 19
3swp_A2e-741518020171NAC domain-containing protein 19
3swp_B2e-741518020171NAC domain-containing protein 19
3swp_C2e-741518020171NAC domain-containing protein 19
3swp_D2e-741518020171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00058PBMTransfer from AT1G61110Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010100577.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010100577.10.0NAC transcription factor 25
SwissprotQ8GY421e-117NAC25_ARATH; NAC transcription factor 25
TrEMBLW9RNN40.0W9RNN4_9ROSA; NAC domain-containing protein 29
STRINGXP_010100577.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16233498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-114NAC domain containing protein 25