PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010100638.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 375aa    MW: 41552.2 Da    PI: 7.5009
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010100638.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.70.00052392771255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  XP_010100638.1 239 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 277
                     6677889999999999998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.312227276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.53E-6237281No hitNo description
SuperFamilySSF474595.5E-10237287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-7241283IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MNRGVLQSSP MQQMMAAGNP NWWNINTMRP PSTHQPPNSS PFLPPPNLYP QFLPTSNSSS  60
NNNNIPSWND NQEQLPESWS QLLLGGLVGE EEKRNIMNHF QVKKLENWEE QMLSSQAPNA  120
SVVDAVKQEH SSASSYVYGH DQDHQFQTAH HVAKPNWSHH HHQVMASTTQ SSPKSCVTSF  180
SSNMLDFSTK PDHHHARHPV SVSVSVPDRS SECNSTATGG ALKKARVQPS STQTTFKVRK  240
EKLGDRITAL HQLVSPFGKT DTASVLLEAI GYIRFLQSQI EALSLPYLGN GSGNMRQQQS  300
VHGERNCMFP EDPGQLLNDN CMKRKGAPDH QDSLEEQKKD LRSRGLCLVP VSCTLQVGSD  360
NGADYWAPAL GGGFR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010100638.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010100638.10.0transcription factor bHLH68
SwissprotQ8S3D11e-109BH068_ARATH; Transcription factor bHLH68
TrEMBLW9RNS90.0W9RNS9_9ROSA; Uncharacterized protein
STRINGXP_010100638.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12233379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.18e-85bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Le Hir R, et al.
    AtbHLH68 transcription factor contributes to the regulation of ABA homeostasis and drought stress tolerance in Arabidopsis thaliana.
    Physiol Plant, 2017. 160(3): p. 312-327
    [PMID:28369972]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]