PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010100707.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

Dof

Protein Properties

Length: 274aa MW: 30061.2 Da PI: 9.4093

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010100707.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.7	1.4e-39	28	87	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknkks XP_010100707.1 28 PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKKS 87 6899******************************************************87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-25	23	82	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.0E-33	30	86	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.096	32	86	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	34	70	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence Send to blast
MASNNNNNNI ACTKQPSGAA ALEKRARPQE QLNCPRCNST NTKFCYYNNY SLTQPRYFCK 60 TCRRYWTEGG TLRNVPVGGG SRKNKKSITN TTTSSSLSSP SSCLSISKNS SNNIINIPDL 120 NPPTNLSHQG QDLNLAFPAM QPKFLYMPSA KSENDNNINH NPRFASSSPL MSFITTTSGQ 180 VLPDSNTATF SSSGLFPFQE FKPSTTALGF SDHGLIGSNK YSFRVQENIN GDHGERTLFP 240 NFGELKHNEV DHQHKGQGNN PTGYWSGLLG GGSW

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010100707.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010100707.2	0.0	dof zinc finger protein DOF2.5 isoform X2
Refseq	XP_024024141.1	0.0	dof zinc finger protein DOF2.5 isoform X1
TrEMBL	W9RDG0	0.0	W9RDG0_9ROSA; Dof zinc finger protein
STRING	XP_010100707.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF674	34	137

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.4	2e-40	Dof family protein

Link Out ? help Back to Top
Entrez Gene	21406237