PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010101265.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 273aa    MW: 30392.8 Da    PI: 8.0717
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010101265.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.8e-18555155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    ++++GVr++  +g+Wv+eIr+p        +r++lg+f tae Aa+a+++a+  ++g
  XP_010101265.1  5 KKFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFETAEAAARAYDQAAILMNG 55
                    59*****999.**********8.....334**********************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.48E-22563No hitNo description
SuperFamilySSF541711.44E-19664IPR016177DNA-binding domain
PROSITE profilePS5103222.036663IPR001471AP2/ERF domain
PfamPF008473.8E-11655IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.1E-32663IPR001471AP2/ERF domain
SMARTSM003803.5E-37669IPR001471AP2/ERF domain
PRINTSPR003675.0E-10718IPR001471AP2/ERF domain
PRINTSPR003675.0E-102945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MVQSKKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFETAE AAARAYDQAA ILMNGQNAKT  60
NFPPAAAATT STTAKVNNNN KMQPSDRERD RDNRDHRDNH GDPPMCQKAL SELLSIKLRK  120
CCKDPSPSLT CLRLDNDNSH IGVWQKRAGS RAGSDWVMRI ELGKKNENMI ASSTSPSGAT  180
TSTSGATNYM NVVEGSHEDN IIIGSSFTAF GSSTSNSADH HHHHHHVLDL DHDHQTDITA  240
RSEEDRIAMQ MIEELLNWNY PAVSASPTVL PSQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-16563160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00527DAPTransfer from AT5G25390Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010101265.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2296341e-60KP229634.1 UNVERIFIED: Boehmeria nivea AP2/ERF domain-containing protein-like (ERF11) mRNA, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010101265.10.0ethylene-responsive transcription factor SHINE 2
TrEMBLW9REY90.0W9REY9_9ROSA; Ethylene-responsive transcription factor WIN1
STRINGXP_010101265.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57633144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11190.12e-49ERF family protein