PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010101389.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 145aa    MW: 16044.3 Da    PI: 9.7378
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010101389.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.8e-0533721054
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    + R +++  ++  L++l+ +      +K + a++L +A+eYI+ L
  XP_010101389.1 33 KERKENLGAKIVALQQLVSPY-----GKTDTASVLLEAMEYIQFL 72
                    566777778899999999998.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.6522372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.2E-92684IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0042978IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-113086IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.63E-53377No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MTEQKRSPCS VDQSSFTSLA SKRHKPDLSI STKERKENLG AKIVALQQLV SPYGKTDTAS  60
VLLEAMEYIQ FLHEQVKVLS APYLQSTPTN KMQELEPYSL RSRGLCLVPV SSTLGVARSN  120
GADIWAPIKT TTSPKFDKSS ISQFH
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010101389.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010101389.21e-104transcription factor bHLH153 isoform X1
SwissprotQ7XJU27e-64BH153_ARATH; Transcription factor bHLH153
TrEMBLW9RQS41e-102W9RQS4_9ROSA; Uncharacterized protein
STRINGXP_010101389.11e-103(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108133138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.53e-66bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]