PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010101750.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB
Protein Properties Length: 387aa    MW: 43253.2 Da    PI: 7.5714
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010101750.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.43.3e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEde+l+ +++++G g+W+t ++  g++R++k+c++rw +yl
   XP_010101750.1 14 KGPWTPEEDEKLIGYIQKHGHGRWRTLPKNAGLKRCGKSCRLRWSNYL 61
                     79********************************************97 PP
2Myb_DNA-binding53.46e-1767111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rgr++ eE+e +++++  lG++ W++Ia++++ gRt++++k++w+++
   XP_010101750.1  67 RGRFSFEEEETIIQLHSVLGNK-WSAIAARLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.7E-26564IPR009057Homeodomain-like
PROSITE profilePS5129425.325965IPR017930Myb domain
SuperFamilySSF466894.87E-3111108IPR009057Homeodomain-like
SMARTSM007171.8E-141363IPR001005SANT/Myb domain
PfamPF002492.9E-161461IPR001005SANT/Myb domain
CDDcd001671.62E-111661No hitNo description
Gene3DG3DSA:1.10.10.605.0E-2665116IPR009057Homeodomain-like
SMARTSM007174.8E-1666114IPR001005SANT/Myb domain
PROSITE profilePS5129420.34266116IPR017930Myb domain
PfamPF002492.4E-1567111IPR001005SANT/Myb domain
CDDcd001671.62E-1169112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MGKTPCCEKD GLKKGPWTPE EDEKLIGYIQ KHGHGRWRTL PKNAGLKRCG KSCRLRWSNY  60
LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLKMG  120
IDPVTHTQRL DLLELSSLLS SSLYNPSSSH QQIHVQNLLG NMGPLVNQNL LNLATTLLSY  180
HPKTTSTSTS TRFNVPQNVQ EINPLNVHQN QFQSFQPNVQ PCTISSTTSN TSTVPSYLND  240
TQFMQLAKMD PLSESLTSCT SWPDSSLSNM WQNSVGEQAL FTPAESYAAM ASTNGYLDST  300
QSSSIVNSLS ENQAFVSSEV PNNIANMSFS SLLSTPSSSP HNLYSSSTTY ANSKNTTTHE  360
DERDSFCSNM FLYSDIANYG LNGNEFV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mse_C8e-31121162105C-Myb DNA-Binding Domain
1msf_C8e-31121162105C-Myb DNA-Binding Domain
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010101750.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010101750.10.0transcription factor MYB74
TrEMBLW9RPD00.0W9RPD0_9ROSA; Transcription factor
STRINGXP_010101750.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G05100.15e-85myb domain protein 74