PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010102202.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

ZF-HD

Protein Properties

Length: 167aa MW: 18579 Da PI: 8.6139

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010102202.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	94.8	7.4e-30	22	76	3	58
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 +v+YkeC++NhA+s+G+havDGC+Ef p+ g++gt++++ C ACgCHR+FHR+e+ XP_010102202.1 22 TVNYKECRRNHAVSIGSHAVDGCREFSPA-GDQGTQQGFLCEACGCHRSFHRKEMI 76 799***********************9.8999*****************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04770	2.2E-26	23	75	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDom	PD125774	8.0E-15	23	74	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMs	TIGR01566	1.0E-23	24	75	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	23.746	25	74	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence Send to blast
MATDHHSKVL SKESETKPSK ITVNYKECRR NHAVSIGSHA VDGCREFSPA GDQGTQQGFL 60 CEACGCHRSF HRKEMIRNGV VHRAPTPAPQ LMLPPAFAVL PTGGYPTLPF VVLHPVDYNS 120 LSQQPPGQSH HDHDQYHPLQ NERLDGCDLI RSGQKPKSIK RPKTEPF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010102202.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010102202.1	1e-123	zinc-finger homeodomain protein 2
TrEMBL	W9RT41	1e-121	W9RT41_9ROSA; Uncharacterized protein
STRING	XP_010102202.1	1e-122	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF17111	6	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24660.1	5e-22	homeobox protein 22

Link Out ? help Back to Top
Entrez Gene	21407222