PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010103039.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 261aa    MW: 28249.3 Da    PI: 9.8439
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010103039.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH352.6e-1171117354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riN  +++Lr l+P +     +K++Ka+ L +++  +k+L
  XP_010103039.1  71 KNHSEAERRRRERINAHLSTLRGLVPCN-----GKMDKATLLAEVILQVKEL 117
                     58*************************9.....9********9998766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.21268117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.8E-971116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-1272119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-1272124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-1074123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048736.14E-4158217No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MDSYSFSGSG RSGLFDPFSS SSSGGGFVVN GGPTGISQSL VLDGKKGELV KAPARVGKKG  60
ISEAKALAAL KNHSEAERRR RERINAHLST LRGLVPCNGK MDKATLLAEV ILQVKELKKN  120
AAEASKGLLI PMDADQVHVE PYNNNRAVGD RTPAFKASLC CGYRPELLSD IRQALDALPV  180
KMVRTEISTL GERLKILFVF TYCKDKNSDD AETCRNIAIS VQEILSSILD KASALAEYSP  240
RTMLPGKKRR FSYFDSSSSS S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17681ERRRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010103039.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010103039.10.0putative transcription factor bHLH107
TrEMBLW9RSY70.0W9RSY7_9ROSA; Uncharacterized protein
STRINGXP_010103039.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF89863143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.13e-30bHLH family protein