PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010103252.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WOX
Protein Properties Length: 463aa    MW: 52870.4 Da    PI: 8.3237
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010103252.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.51.8e-21118178257
                     T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     r+R+t+t+ ql++Le++Fe+ n +ps+++++e+++ l    +++e++V++WFqNrRa+ k+
  XP_010103252.1 118 RQRWTPTPVQLQILERMFEQgNGTPSKQKIKEITSDLsqhgQISETNVYNWFQNRRARSKR 178
                     89*****************99**************************************97 PP
2Wus_type_Homeobox99.72.1e-32117180265
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ar+RWtPtp Q++iLe+++++G  tP+k++i++it+ L+++G+i+++NV++WFQNr+aR+++kq
     XP_010103252.1 117 ARQRWTPTPVQLQILERMFEQGNGTPSKQKIKEITSDLSQHGQISETNVYNWFQNRRARSKRKQ 180
                        789***********************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.8E-18113183IPR009057Homeodomain-like
PROSITE profilePS5007115.224114179IPR001356Homeobox domain
SMARTSM003895.1E-15116183IPR001356Homeobox domain
SuperFamilySSF466892.52E-18117181IPR009057Homeodomain-like
CDDcd000861.60E-13118180No hitNo description
PfamPF000462.9E-19118178IPR001356Homeobox domain
PfamPF101811.2E-15361424IPR019328GPI-GlcNAc transferase complex, PIG-H component, conserved domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
GO:0017176Molecular Functionphosphatidylinositol N-acetylglucosaminyltransferase activity
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    Send to blast
MGWEKQQLQL QLQLQLQQQQ QTQEDQNMRE RSEQQQQVNN NSNNNLAFHH HHHHVKVMTD  60
EQLETLRKQI SVYATICEQL VQMHKNLTSH QDLPPGVRLG NLYCDPLMTS AGHKITARQR  120
WTPTPVQLQI LERMFEQGNG TPSKQKIKEI TSDLSQHGQI SETNVYNWFQ NRRARSKRKQ  180
HNSTPNNAES EVETEVESPK DKKTKPEELL SQHNSAPRAE DICFQNPEIS SDLHFFDPQS  240
NKGEAIFTSN TCLRPPARNL AQMPFYDGLL SISNSRMVDS RYSYSYSYSG EGKGSVDIHI  300
VARKNGVKGG FFVFFSALLI LANFFYLFQL KGNSIVIVLW SFVIEALLLK LLLWKAVKKE  360
SVLVMPAFGV QLETHYVSGK VIRRFIPVDK ILKPVVLECV TPVTCYWCLC LVVCGEAELI  420
SVFETLRPPV KILVPIWKAL RAATNKEEIP NTSITENGEG GLQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171179RRARSKRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00617PBMTransfer from AT4G35550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010103252.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024025789.10.0WUSCHEL-related homeobox 8 isoform X1
TrEMBLW9S9Q30.0W9S9Q3_9ROSA; WUSCHEL-related homeobox 13
STRINGXP_010103252.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18553493
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.15e-83WUSCHEL related homeobox 13