PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010103380.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

TCP

Protein Properties

Length: 235aa MW: 25949.6 Da PI: 4.5264

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010103380.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	67.2	5.8e-21	1	105	22	98
TCP 22 vRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssaseceaesssssasnsssg............. 88 +Rls+++a++fFdLq+ LGf ++skt+eWLl++a +ik+l ++ +s+++++ce g XP_010103380.1 1 MRLSIDVAREFFDLQELLGFERASKTVEWLLRKARSEIKKLKDSnneggcsstcpemqtPSPNSESCE-------------Gasgldevginged 82 8*******************************************777766655555543333333332.............02222233333333 PP TCP 89 ................kaaksaaksk 98 + s+++++ XP_010103380.1 83 qgvagtssskplinqpA---SNKSEE 105 44444444444443221...111111 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	1.7E-20	1	112	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	22.627	1	41	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence Send to blast
MRLSIDVARE FFDLQELLGF ERASKTVEWL LRKARSEIKK LKDSNNEGGC SSTCPEMQTP 60 SPNSESCEGA SGLDEVGING EDQGVAGTSS SKPLINQPAS NKSEEKQQTG DQLPNQNMMD 120 IDMNNNIVIP NSSLGAVMQV SRYDQRYEFS QEILPISNPN GWNIFQVSNH DHIRQTSTTS 180 TGTTAPIVDY ETYSYLVNHL EKWNNSLVAN SVSNVGTTSG ATGFRVPQQG DYRVF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010103380.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024028427.1	6e-94	transcription factor TCP10
TrEMBL	W9RL10	1e-175	W9RL10_9ROSA; Uncharacterized protein
STRING	XP_010103380.1	1e-176	(Morus notabilis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18550.2	1e-15	TCP family protein

Link Out ? help Back to Top
Entrez Gene	21386854