PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010104110.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 343aa    MW: 39050 Da    PI: 8.4287
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010104110.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.72.4e-49191452128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                     p+GfrFhP+deel+v+yLk+kv++++l++ +v  e+d+yk++Pw+Lpkk+  +e ewyfFs+rd+ky++g+r+nra+  gyWkatg+d++++s+ 
  XP_010104110.1  19 PAGFRFHPSDEELIVHYLKNKVASRPLPA-SVAVEIDLYKYNPWELPKKALFGEGEWYFFSPRDRKYPKGERPNRAAGLGYWKATGSDQPIFSSf 112
                     89***************************.8999*************88888999**************************************99 PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +++++g+kk+Lvfy gr +kg+ktdW m+eyrl
  XP_010104110.1 113 GSKQIGVKKSLVFYAGRPQKGTKTDWYMNEYRL 145
                     999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-608172IPR003441NAC domain
PROSITE profilePS5100556.39818172IPR003441NAC domain
PfamPF023653.1E-2519145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MEKYLSVNSP TTSQHFHFPA GFRFHPSDEE LIVHYLKNKV ASRPLPASVA VEIDLYKYNP  60
WELPKKALFG EGEWYFFSPR DRKYPKGERP NRAAGLGYWK ATGSDQPIFS SFGSKQIGVK  120
KSLVFYAGRP QKGTKTDWYM NEYRLLDSSI KPPNLKGSMR LDDWVLCRVR CKGDMTKNTG  180
DNIQDSHSTK FLCSQPNVEK TRLARANRDM ISDYISKDCL LLAWILSGQP LPPVDTNLSN  240
VNFEGSENGN SLNDYGRLNS HIVSPTDNNL SLLNCIISKE QQCIGSKSEY ENSLSSKTLA  300
ESDIYEYFHK QSRYNIINSD CPMDSIGKFQ ELNELALTGR YSQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-6041693162NO APICAL MERISTEM PROTEIN
1ut4_B2e-6041693162NO APICAL MERISTEM PROTEIN
1ut7_A2e-6041693162NO APICAL MERISTEM PROTEIN
1ut7_B2e-6041693162NO APICAL MERISTEM PROTEIN
3swm_A2e-601516917165NAC domain-containing protein 19
3swm_B2e-601516917165NAC domain-containing protein 19
3swm_C2e-601516917165NAC domain-containing protein 19
3swm_D2e-601516917165NAC domain-containing protein 19
3swp_A2e-601516917165NAC domain-containing protein 19
3swp_B2e-601516917165NAC domain-containing protein 19
3swp_C2e-601516917165NAC domain-containing protein 19
3swp_D2e-601516917165NAC domain-containing protein 19
4dul_A2e-6041693162NAC domain-containing protein 19
4dul_B2e-6041693162NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010104110.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010104110.10.0NAC transcription factor 56
TrEMBLW9RN360.0W9RN36_9ROSA; NAC domain-containing protein 68
STRINGXP_010104110.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24162981
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.13e-76NAC domain containing protein 25