PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010104121.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family S1Fa-like
Protein Properties Length: 79aa    MW: 8732.47 Da    PI: 10.8655
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010104121.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA112.91.4e-351479570
            S1FA  5 kveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                    ++ea G+n   ivll+v+glll+flvgny+ly+yaqk+lPPrkkkPvs kkl++eklk Gv++PGe
  XP_010104121.1 14 NAEANGFNARSIVLLIVSGLLLIFLVGNYALYTYAQKSLPPRKKKPVSMKKLRKEKLKHGVSAPGE 79
                    689**************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046895.8E-331579IPR006779DNA binding protein S1FA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    Send to blast
MVGFLIEQGT LFKNAEANGF NARSIVLLIV SGLLLIFLVG NYALYTYAQK SLPPRKKKPV  60
SMKKLRKEKL KHGVSAPGE
Functional Description ? help Back to Top
Source Description
UniProtDNA-binding protein that specifically recognizes a negative element (S1F) within the RPS1 promoter. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010104121.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010104121.24e-44DNA-binding protein S1FA
RefseqXP_024026346.14e-44DNA-binding protein S1FA
SwissprotP425533e-11S1FA1_ORYSJ; DNA-binding protein S1FA1
TrEMBLW9SCA37e-49W9SCA3_9ROSA; DNA-binding protein S1FA1
STRINGXP_010104121.11e-49(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54093355