PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010104171.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 237aa    MW: 26858 Da    PI: 9.4759
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010104171.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.89.5e-12112153351
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                      +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  XP_010104171.1 112 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 153
                     79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.7E-6111154IPR001471AP2/ERF domain
SMARTSM003801.3E-4111168IPR001471AP2/ERF domain
SuperFamilySSF541714.97E-8112156IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.7E-6114158IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MVSLRRRKLL GLCSGRSSVL TLLPRFSANE IAPANSTQNT RSNSVHPVAS DDRKNAEGDV  60
SVKGEPGSSN LSGSGLSGSQ REQQNQQVAG PPIKRRKRHR RKHFQNQEPC LMRGVYFKNM  120
KWQAAIKVDK KQIHLGTVGS QEEAARLYDR AAFMCGREPN FELSEEEKQE LRQFKWDEFL  180
AKTRHAITHK KHRRRVGAEP EKMSEPSPLE NDDDLDIKNE DYDLSGSEEM EPDSSVS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010104171.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010104171.11e-177ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_024026403.11e-177ethylene-responsive transcription factor-like protein At4g13040
TrEMBLW9RYM61e-176W9RYM6_9ROSA; Ethylene-responsive transcription factor-like protein
STRINGXP_010104171.11e-177(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.19e-49ERF family protein