PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010104558.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 374aa    MW: 42525.8 Da    PI: 4.6379
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010104558.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.58.4e-12208251654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  XP_010104558.1 208 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 251
                     589*********************66......****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.491202251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-16206270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.3E-12208257IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-9208251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.42E-4209255No hitNo description
Gene3DG3DSA:4.10.280.103.3E-16209271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048737.85E-4300341No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MELNEHDFLE ELLSLRRDMT WEASNNIPTG IMNYEIFSSF DNYHHFDQNP ETQNTSNVVL  60
PNSSCSQEII SPTSLDHHQH DSFNSYSSLM NDIYCPSLSS DFSAVEPVQF STDQFYSSTP  120
TFPIQDQDYI PLCTKSMEEE ELGILGDEIH NLETQVSCKM EPIQSSISSP EMLVPAVFNM  180
GHHVVPNLER NAKANNKSKL QGQPSKNLMA ERRRRKRLND RLSMLRSIVP KISKMDRTSI  240
LGDTIDYMKE LLERINSLQQ EMEESSTELS EIGLFKDVKP NEVLVRNSPK FDVERRNRDT  300
RIEICCAGKP GMLFSTVTTL EALGLEIQQC VISCFNDFAM QASCSEDLEK RTLASSEDVK  360
QALFKNAGYG GRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1210217ERRRRKRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010104558.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010104558.10.0transcription factor bHLH61
TrEMBLW9RNT00.0W9RNT0_9ROSA; Uncharacterized protein
STRINGXP_010104558.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118634103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.15e-82beta HLH protein 93