PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010104815.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 349aa    MW: 39476.2 Da    PI: 5.5436
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010104815.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.81.7e-20198248255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   + +  r++lg+f+ta eAaka+++a+ kl+g
  XP_010104815.1 198 HYRGVRQRP-WGKYAAEIRDP---NrRGSRVWLGTFDTAIEAAKAYDRAAFKLRG 248
                     7********.**********9...4334*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.8E-32197257IPR001471AP2/ERF domain
PROSITE profilePS5103224.25198256IPR001471AP2/ERF domain
SMARTSM003801.9E-36198262IPR001471AP2/ERF domain
CDDcd000182.84E-31198256No hitNo description
PfamPF008472.0E-14198248IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-23198257IPR016177DNA-binding domain
PRINTSPR003671.4E-13199210IPR001471AP2/ERF domain
PRINTSPR003671.4E-13238258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MATINEVSKL ELIKQYLLGD LPPVSSFSNF DRNQWISDLK TEFSSSQSQS DSHCSRTSSS  60
SDYLDSSDVL DFTSDFEPKP DNFDFDFDFD FSEFEMKPEL IDLTTPKSRN LTSQSSDASF  120
EFESKPQIID LRSHIPQSSS ISFEFESKPQ ISGQKGSQLN RKPSLTISLP AKTEWIQFSA  180
PVPPASVQKP AVEEEIRHYR GVRQRPWGKY AAEIRDPNRR GSRVWLGTFD TAIEAAKAYD  240
RAAFKLRGSK AILNFPLEAG KYDVVVRTDK KKRRRQEEGG YVSEVVKEPK KEKVTEFLDT  300
VSYVKNMPLT PSNWTAVWDS SDGQGVFNVP PLSPLSPHPS MGYPQLMVV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-29197257161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A2e-29197257464ATERF1
3gcc_A2e-29197257464ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1269274KKKRRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00549DAPTransfer from AT5G47230Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010104815.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010104815.10.0ethylene-responsive transcription factor 5
TrEMBLW9RPJ40.0W9RPJ4_9ROSA; Ethylene-responsive transcription factor 5
STRINGXP_010104815.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108534109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.12e-58ethylene responsive element binding factor 5