PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010104873.1
Common NameDREB4C
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 271aa    MW: 29987.1 Da    PI: 5.1787
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010104873.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-1779128255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      ++GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a++ ++g
  XP_010104873.1  79 TFRGVRMRQ-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALTIKG 128
                     59****998.**********843...6**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.12E-2179137IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.2E-3179137IPR001471AP2/ERF domain
PROSITE profilePS5103223.19679136IPR001471AP2/ERF domain
SMARTSM003802.2E-3779142IPR001471AP2/ERF domain
PRINTSPR003671.1E-98091IPR001471AP2/ERF domain
CDDcd000181.20E-3180138No hitNo description
PfamPF008471.1E-1180128IPR001471AP2/ERF domain
PRINTSPR003671.1E-9102118IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MKDPSLLNNT ETWENFPTTS SSSSSSPSKN TSKRSRQIDH ITEDNDNNNN KNNNSTTTSL  60
AGGSESDKCK AKNGSKHPTF RGVRMRQWGK WVSEIREPRK KSRIWLGTFP TPEMAARAHD  120
VAALTIKGRS AFLNFPELAP ELPRPATSSA KDIQIAAAKA AYAYTTTAAI ATSTTAAHNT  180
TSFSETADNA HDIPRRDDGI VTTEENDDAF FDLPDLMLMD VCYNNRQIMD DYFCAAYWPV  240
ISTANEGDYQ VEDSTNCAGL RLIDLECLPS W
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-1874136972Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010104873.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6783940.0KF678394.1 Morus notabilis dehydration responsive element binding transcription factor (DREB4C) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010104873.20.0ethylene-responsive transcription factor TINY
TrEMBLW6FIZ70.0W6FIZ7_9ROSA; Dehydration responsive element binding transcription factor
STRINGXP_010104873.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16750.15e-45ERF family protein