PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010105032.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

bHLH

Protein Properties

Length: 239aa MW: 26953.1 Da PI: 9.5726

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010105032.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38	3e-12	82	125	8	55
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rEr RR ++N++f+ L +++P++ +K sK +L+ ++eYIk+L+ XP_010105032.1 82 RERDRRVKMNESFALLESIVPSL----LPKSSKEKVLQTTTEYIKYLE 125 8*******************5....49***************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	12.144	74	124	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.2E-6	80	130	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.67E-6	82	123	No hit	No description
Gene3D	G3DSA:4.10.280.10	4.5E-13	82	138	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.14E-12	82	149	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	8.2E-10	82	125	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence Send to blast
MEKEGKRKVK EEEQEKEEEK DISKLVLGIM EGYSDSVIPP LSHFQSPRSE SAINVVAEYN 60 SSSKRKRENI RPKPPKEDCL GRERDRRVKM NESFALLESI VPSLLPKSSK EKVLQTTTEY 120 IKYLEEKKKM LEKLKESSRS PMAATRSLVF PCTSRNSSVT VTACGSVALF GIESRKRHGF 180 VTQIFMVFQK HRAEVLAANV VVNDGLLTLT VTAFVNGDES TTIEGIKRDI LMLKNLDGV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010105032.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	W9RQ46	1e-173	W9RQ46_9ROSA; Uncharacterized protein
STRING	XP_010105032.1	1e-174	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF14330	13	14

Link Out ? help Back to Top
Entrez Gene	21391838