PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010105432.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family Trihelix
Protein Properties Length: 270aa    MW: 30328.2 Da    PI: 8.6415
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010105432.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix40.76.4e-1318108186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...........rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 
                     +W++  + aLiea  ++  +l rg+l++++W+e+s+++           +  +  ++ +qCk++++ l+k+yk +k   +       s++++f +
  XP_010105432.1  18 CWSEVATEALIEAWADRFLQLTRGNLRQKDWKEISDAVngrddggdgggEGAKPYKTDVQCKNRIDTLKKKYKLEKSKPSP------SSWRFFPR 106
                     7**********************************************97444445799***************99887775......56999999 PP

        trihelix  85 le 86 
                     l+
  XP_010105432.1 107 LD 108
                     86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.9E-2416109No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MDRPGPTARP HGGGREDCWS EVATEALIEA WADRFLQLTR GNLRQKDWKE ISDAVNGRDD  60
GGDGGGEGAK PYKTDVQCKN RIDTLKKKYK LEKSKPSPSS WRFFPRLDFL IGANAKKPAT  120
AVTLTIKRPG PRPLPRNRSP ESSIGDEDGD DDEYGDGDDV VVRKHRTEAG ELSDGAAGRE  180
LARAILKFGE IYERIESSKQ KMMMELERQR MEFAKDLEFQ RLNMFMDAQL ELEKMKRPKY  240
APGSGKTSQS ALNVVLFFSN FAERINLIGG
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00488DAPTransfer from AT5G05550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010105432.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024027329.10.0trihelix transcription factor ASIL2 isoform X4
SwissprotQ9LJG81e-32ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLW9RZF40.0W9RZF4_9ROSA; Uncharacterized protein
STRINGXP_010105432.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18873379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05550.12e-61sequence-specific DNA binding transcription factors