PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010106004.1
Common NameDREB1B
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 239aa    MW: 26627.7 Da    PI: 4.7422
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010106004.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.4e-1873123155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +++Wv+e+r+p   +k++r++lg++ tae+Aa+a++ a+++++g
  XP_010106004.1  73 PVYRGVRRRN-NNKWVCELREP---NKKTRIWLGTYPTAEMAARAHDVAALAFRG 123
                     68*****887.8*********8...347************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.2E-1473123IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-2174133IPR016177DNA-binding domain
SMARTSM003802.0E-2974137IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.1E-3174133IPR001471AP2/ERF domain
PROSITE profilePS5103222.43174131IPR001471AP2/ERF domain
PRINTSPR003676.4E-87586IPR001471AP2/ERF domain
CDDcd000182.11E-3075133No hitNo description
PRINTSPR003676.4E-897113IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MDNFNNLSQF SDPYPLVWNS DSTTLECYKA ESSSMSADSG LSRASNSDEE VILAASRPKK  60
RAGRRVFKET RHPVYRGVRR RNNNKWVCEL REPNKKTRIW LGTYPTAEMA ARAHDVAALA  120
FRGRSACLNF ADSTWRLPAP ASSDANDICA AAAEAAKAFR PREYGGVLGS SEGMVVEKEE  180
EKGVEEEQRV FYLDEEEVFC MPSFFADLAE GLLLPPPPSY MSSDDVAIDA DVSLWSYSI
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates abscisic acid- and dehydration-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation. {ECO:0000269|PubMed:11798174, ECO:0000269|PubMed:12376631}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00557DAPTransfer from AT5G51990Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010106004.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By high-salt stress, drought stress and abscisic acid (ABA) treatment. {ECO:0000269|PubMed:11798174, ECO:0000269|PubMed:12376631}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6783970.0KF678397.1 Morus notabilis dehydration responsive element binding transcription factor (DREB1B) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010106004.11e-177dehydration-responsive element-binding protein 1E
SwissprotQ9FJ932e-68DRE1D_ARATH; Dehydration-responsive element-binding protein 1D
TrEMBLW6FGA31e-175W6FGA3_9ROSA; Dehydration responsive element binding transcription factor
STRINGXP_010106004.11e-176(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24333224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.13e-53dehydration response element B1A
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Guttikonda SK, et al.
    Overexpression of AtDREB1D transcription factor improves drought tolerance in soybean.
    Mol. Biol. Rep., 2014. 41(12): p. 7995-8008
    [PMID:25192890]
  3. Zhang T, et al.
    Overexpression of a NF-YB3 transcription factor from Picea wilsonii confers tolerance to salinity and drought stress in transformed Arabidopsis thaliana.
    Plant Physiol. Biochem., 2015. 94: p. 153-64
    [PMID:26093308]
  4. Carlow CE, et al.
    Nuclear localization and transactivation by Vitis CBF transcription factors are regulated by combinations of conserved amino acid domains.
    Plant Physiol. Biochem., 2017. 118: p. 306-319
    [PMID:28675818]
  5. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]