PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010106451.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family Dof
Protein Properties Length: 354aa    MW: 38126.2 Da    PI: 9.3404
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010106451.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.85.6e-3971131262
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     +e+al+cprC+s+ntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nkks+
  XP_010106451.1  71 PETALNCPRCESANTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSK 131
                     67899*****************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-3259127IPR003851Zinc finger, Dof-type
PfamPF027011.4E-3274129IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.34875129IPR003851Zinc finger, Dof-type
PROSITE patternPS01361077113IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009640Biological Processphotomorphogenesis
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MVFSSIPVYL DPPNWHQQQN HHHTLASSES PQLPPLPPPQ LSHGTGSGSG PGSIRPGSMA  60
DRARLAKMPQ PETALNCPRC ESANTKFCYF NNYSLSQPRH FCKTCRRYWT RGGALRNVPV  120
GGGCRRNKKS KSGSTSRSKS PATSAEKQQI TAGPNSIPNP TSVIPSGAEL VGHFSQPQTH  180
SSFMASIQNL ARFGGGAGGG LGLNFSEIQG QTEHHHNIGF QIGSANNISS DQSGVILQGG  240
EVDQWRLQQF PFLATPDFNQ SSTAGFYNPL IQGSNTTTTT EVEDCVIRTN MPSDTPRVSQ  300
FPPVKMERRQ GLNLSSRPSL GISENNHNFW GGNSSSTAWT DLSGLNSSSA SHLL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00407DAPTransfer from AT3G55370Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010106451.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010106451.10.0dof zinc finger protein DOF3.6
TrEMBLW9S2590.0W9S259_9ROSA; Dof zinc finger protein
STRINGXP_010106451.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65634143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.17e-45OBF-binding protein 3