PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010106645.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 254aa    MW: 29497.4 Da    PI: 4.9174
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010106645.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM97.61.9e-30101372128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratk...sgyWkatgkdke 91 
                     p+G+rF+Pt+eelv++yLk+kv + +++  +  +k++++y++ P++L++++    e e+y F+k+  k+++gkr +r ++   +gyWka+  + +
  XP_010106645.1  10 PVGIRFSPTEEELVHYYLKNKVMSCPFHDPTNrFKQLQLYNYTPEKLRETYGVqIEAEMYIFVKKVLKHQKGKRLERRIAngsNGYWKASTGEIN 104
                     89************************6665555**************954444135599***************99954336699***9988888 PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +   +g l+g ++tLv+y   + +gekt+W+m eyrl
  XP_010106645.1 105 MNL-DGVLIGHRRTLVYY---NGEGEKTNWLMYEYRL 137
                     888.99************...567788********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.15E-364157IPR003441NAC domain
PROSITE profilePS5100536.6479157IPR003441NAC domain
PfamPF023657.2E-2010137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MDIMHVNPFP VGIRFSPTEE ELVHYYLKNK VMSCPFHDPT NRFKQLQLYN YTPEKLRETY  60
GVQIEAEMYI FVKKVLKHQK GKRLERRIAN GSNGYWKAST GEINMNLDGV LIGHRRTLVY  120
YNGEGEKTNW LMYEYRLPDH NHMVQLEDWL LCKVYFKGKE EIKSTQVNLV EEPAAILNSN  180
GDVKQVEYSS ASQATAEQPT TMVSSNNDVQ LPDSNQIIPF CFDSITEDQL FQEAIFTNDI  240
VAGDMFFEDL DLWG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A3e-2011577168NAC domain-containing protein 19
3swm_B3e-2011577168NAC domain-containing protein 19
3swm_C3e-2011577168NAC domain-containing protein 19
3swm_D3e-2011577168NAC domain-containing protein 19
3swp_A3e-2011577168NAC domain-containing protein 19
3swp_B3e-2011577168NAC domain-containing protein 19
3swp_C3e-2011577168NAC domain-containing protein 19
3swp_D3e-2011577168NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010106645.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010106645.10.0NAC transcription factor 29
TrEMBLW9S2Q70.0W9S2Q7_9ROSA; NAC domain-containing protein 7
STRINGXP_010106645.10.0(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.12e-26NAC domain containing protein 32