PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010106868.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 484aa    MW: 52699.6 Da    PI: 6.6822
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010106868.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-20224273255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  XP_010106868.1 224 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 273
                     7********.**********7.....337*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.5E-14224273IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-32224282IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-22224282IPR016177DNA-binding domain
PROSITE profilePS5103225.712224281IPR001471AP2/ERF domain
SMARTSM003801.2E-36224287IPR001471AP2/ERF domain
PRINTSPR003671.5E-11225236IPR001471AP2/ERF domain
CDDcd000183.36E-15232283No hitNo description
PRINTSPR003671.5E-11247263IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MCLKVANQRS SGDDRDVRFP PQSDDVQDQQ PEAAAAINTT VTTTQELLMM MRQQQSQYAV  60
VPQQPPLPPP LQQQQMIFSG YSRPTEMSAI VSALTHVVSG RRGSGSTAGN WGSHDSRFGH  120
QLYSPNSPCS SGSGSWISGQ KRNRDDEEET AVAAAQLLID SAPQQRPFRP DESSSASATE  180
EASNIMSSGT TAATVVAAAA PPSEMAAAAA AAPPEESGGE RRRRYRGVRQ RPWGKWAAEI  240
RDPHKAARVW LGTFDTAEAA ARAYDEAALR FRGNRAKLNF PENVRTIPAP RPIAAAAGES  300
SATTLLPPVQ PNFFQTTPFH DSSSDAALLR DYFQYSQLLQ SSGDFSGGHL QQQLQLQLQQ  360
QQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ QQQQQQPAAS LLEQMLYNSQ MVSSSSSSSS  420
SQSPFMFSSS SSSSSVPSSS SPVLHPLFLS AQQPNTQNPP SGSHFPSLTW PPHSGYHPPP  480
SSSG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-22223284163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1219224ERRRRY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010106868.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010106868.10.0ethylene-responsive transcription factor ABR1 isoform X1
TrEMBLW9S5Z50.0W9S5Z5_9ROSA; Ethylene-responsive transcription factor
STRINGXP_010106868.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49193253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.17e-15ethylene response factor 110