PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010107170.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 255aa    MW: 28858.2 Da    PI: 7.0947
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010107170.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00043828323
                    ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                    C++C+k++ +   L  H+r+H
  XP_010107170.1  8 CKICNKRYANGKALGGHMRSH 28
                    ********************9 PP
2zf-C2H210.90.0014133155123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC+ C+k+F +   L  H  +H
  XP_010107170.1 133 FKCETCNKVFGSYQALGGHKANH 155
                     89********9999998888777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.64E-5333No hitNo description
SMARTSM003550.53628IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.577633IPR007087Zinc finger, C2H2
PfamPF139123.7E-8730IPR007087Zinc finger, C2H2
PROSITE patternPS000280828IPR007087Zinc finger, C2H2
SuperFamilySSF576675.74E-8133155No hitNo description
PfamPF139121.6E-11133157IPR007087Zinc finger, C2H2
PROSITE profilePS501579.411133160IPR007087Zinc finger, C2H2
SMARTSM003550.09133155IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280135155IPR007087Zinc finger, C2H2
SuperFamilySSF576675.74E-8193220No hitNo description
PfamPF139123.3E-8197220IPR007087Zinc finger, C2H2
PROSITE profilePS501579.764198225IPR007087Zinc finger, C2H2
SMARTSM003550.17198220IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280200220IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MDSKQKICKI CNKRYANGKA LGGHMRSHLA KLPLPLPPPK PNQPSVVSST SPSLDELSQE  60
FSSVVEDAIL ESENENENES RRRHVTRQRS KRRRRSETFS AEEAAFFLVK LSKDKWDKRE  120
AVGHHHEEEV AKFKCETCNK VFGSYQALGG HKANHKKMMK SEISDDDEDN YESTDEEDGN  180
EGRNNNYAVV DDHPIRTFEC PFCFKVFGSG QALGGHKKVH FSNNLPIITR ISSRKFGNSL  240
IIDLNLPAVA DEEVE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18094RRRHVTRQRSKRRRR
28691RQRSKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010107170.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024028502.11e-129zinc finger protein ZAT9
TrEMBLW9S4460.0W9S446_9ROSA; Zinc finger protein ZAT9
STRINGXP_010107170.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76734122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.15e-27C2H2-like zinc finger protein