PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010107796.1
Common NameDREB6E
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 390aa    MW: 43618.9 Da    PI: 8.2365
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010107796.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.7e-19208257356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     ++GVr+++ +g+WvAeIr p++   r+r++lg+f+tae+Aa a++ a+  l+ge
  XP_010107796.1 208 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEDAAMAYDTAAYMLRGE 257
                     8******9.**********955...5*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.22E-31206265No hitNo description
SMARTSM003802.1E-35207270IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-31207266IPR001471AP2/ERF domain
PROSITE profilePS5103222.51207264IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-22207265IPR016177DNA-binding domain
PRINTSPR003671.1E-10208219IPR001471AP2/ERF domain
PfamPF008474.4E-13208257IPR001471AP2/ERF domain
PRINTSPR003671.1E-10230246IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MEDQFPKMET FMAKGLLPSY FQGSNFFDDP NILSALTQTS YCHENGNGNS PRSLSSSPDR  60
ILSSSESSSS NNIPEFNSNH DFSPPFVPLD LLKILDPKMT RAQVSEPDSP PKSPNLTLFL  120
QDSGSRNQDP SFPMPQQGQL LGYQQGIEWL KMDQHLSNYQ SKGFFNDYWL SATKTQPMKN  180
TGSRRVIRIN HQQNPSLSSS VSSPGKLFRG VRQRHWGKWV AEIRLPRNRT RVWLGTFDTA  240
EDAAMAYDTA AYMLRGEYAH LNFPDMKHQL KANSLNGNTA ALLEAKLQAL SKGASGPNQK  300
NKPAVDHHQS SPKKLLSGDS KVNGLEQNHN PTRKEWQFIG LEGKMGCQAV NIENKKTQDL  360
VSDVEAVQLS RMPSLDMDTI WDALLVSDTS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-21203274168ATERF1
3gcc_A7e-21203274168ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010107796.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6783980.0KF678398.1 Morus notabilis dehydration responsive element binding transcription factor (DREB6E) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010107796.10.0ethylene-responsive transcription factor ERF062
TrEMBLW6FTG00.0W6FTG0_9ROSA; Dehydration responsive element binding transcription factor
STRINGXP_010107796.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101023141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.14e-57ERF family protein