PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010107932.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

bZIP

Protein Properties

Length: 459aa MW: 49302.5 Da PI: 8.9539

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010107932.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.3	7.8e-14	355	398	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+ + XP_010107932.1 355 RRQRRMIKNRESAARSRARKQAYTLELEAEVAKLKEMNEELQRK 398 69************************************999765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.8E-12	351	419	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.622	353	398	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	8.8E-12	355	401	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.88E-10	355	403	No hit	No description
CDD	cd14707	6.04E-25	355	401	No hit	No description
Gene3D	G3DSA:1.20.5.170	9.2E-14	355	401	No hit	No description
PROSITE pattern	PS00036	0	358	373	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence Send to blast
MGSNMNFKNF GDATPPLGDI GCGGLKPAGN SYSLARQPSI YSLTFDEFQN SMGKDFGSMN 60 MDELLKSIWS AEDTQIMASS VGGSGGSGAL NGNLQRQGSI TLPRTLSQKT VDEVWRDLVK 120 ESDGDKEGSN VGGGSNVPQR QQTLGEMTLE EFLVRAGIVR EDAQAQQTGR PASTANNNNA 180 NNLAFGFQQP NQNNGIFDNR VMAMNNSPLN LPSSLPLSIG GVRSSQQQAQ QKPQKEPLFP 240 KPAATLAFVQ PMHLVSNAQL MSAGTRETNQ TTVGIAEPAV NAALVRGRGL PGGGVGMANI 300 GAGGVTVAAA SPASHMSSDV ISKASVETPT SVSPIPYMFS RRGKCSAALE KVIERRQRRM 360 IKNRESAARS RARKQAYTLE LEAEVAKLKE MNEELQRKQA EFIEMQKNEI SLVTFHQQSI 420 AWCECKNVFS SPFRMHPNSV LDSPTLRSYP PMSCGASAP

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence Send to blast

MGSNMNFKNF GDATPPLGDI GCGGLKPAGN SYSLARQPSI YSLTFDEFQN SMGKDFGSMN  60
MDELLKSIWS AEDTQIMASS VGGSGGSGAL NGNLQRQGSI TLPRTLSQKT VDEVWRDLVK  120
ESDGDKEGSN VGGGSNVPQR QQTLGEMTLE EFLVRAGIVR EDAQAQQTGR PASTANNNNA  180
NNLAFGFQQP NQNNGIFDNR VMAMNNSPLN LPSSLPLSIG GVRSSQQQAQ QKPQKEPLFP  240
KPAATLAFVQ PMHLVSNAQL MSAGTRETNQ TTVGIAEPAV NAALVRGRGL PGGGVGMANI  300
GAGGVTVAAA SPASHMSSDV ISKASVETPT SVSPIPYMFS RRGKCSAALE KVIERRQRRM  360
IKNRESAARS RARKQAYTLE LEAEVAKLKE MNEELQRKQA EFIEMQKNEI SLVTFHQQSI  420
AWCECKNVFS SPFRMHPNSV LDSPTLRSYP PMSCGASAP

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269\|PubMed:11884679, ECO:0000269\|PubMed:15361142}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010107932.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:16284313}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024028907.1	0.0	bZIP transcription factor 46
Swissprot	Q9M7Q3	3e-96	AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6
TrEMBL	W9RY54	0.0	W9RY54_9ROSA; ABSCISIC ACID-INSENSITIVE 5-like protein 6
STRING	XP_010107932.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1962	34	81

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49720.2	1e-77	abscisic acid responsive element-binding factor 1

Link Out ? help Back to Top
Entrez Gene	21410137

Publications ? help Back to Top
Zhao Q, et al. Regulation and function of Arabidopsis AtGALK2 gene in abscisic acid response signaling. Mol. Biol. Rep., 2018. [PMID:24078097] Bao Y, et al. The tumor necrosis factor receptor-associated factor (TRAF)-like family protein SEVEN IN ABSENTIA 2 (SINA2) promotes drought tolerance in an ABA-dependent manner in Arabidopsis. New Phytol., 2014. 202(1): p. 174-87 [PMID:24350984] González-Grandío E,Cubas P Identification of gene functions associated to active and dormant buds in Arabidopsis. Plant Signal Behav, 2014. 9(2): p. e27994 [PMID:24518068] Xie M, et al. AtWNK9 is regulated by ABA and dehydration and is involved in drought tolerance in Arabidopsis. Plant Physiol. Biochem., 2014. 77: p. 73-83 [PMID:24561249] Kim EY,Seo YS,Park KY,Kim SJ,Kim WT Overexpression of CaDSR6 increases tolerance to drought and salt stresses in transgenic Arabidopsis plants. Gene, 2014. 552(1): p. 146-54 [PMID:25234727] Zhang H, et al. The RING finger ubiquitin E3 ligase SDIR1 targets SDIR1-INTERACTING PROTEIN1 for degradation to modulate the salt stress response and ABA signaling in Arabidopsis. Plant Cell, 2015. 27(1): p. 214-27 [PMID:25616872] Baek D, et al. A Role for Arabidopsis miR399f in Salt, Drought, and ABA Signaling. Mol. Cells, 2016. 39(2): p. 111-8 [PMID:26674968] Bao Y, et al. Overexpression of the NDR1/HIN1-Like Gene NHL6 Modifies Seed Germination in Response to Abscisic Acid and Abiotic Stresses in Arabidopsis. PLoS ONE, 2016. 11(2): p. e0148572 [PMID:26849212] Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Li X, et al. Dual Function of NAC072 in ABF3-Mediated ABA-Responsive Gene Regulation in Arabidopsis. Front Plant Sci, 2016. 7: p. 1075 [PMID:27486475] Wang Z, et al. Overexpressing Arabidopsis ABF3 increases tolerance to multiple abiotic stresses and reduces leaf size in alfalfa. Plant Physiol. Biochem., 2016. 109: p. 199-208 [PMID:27721135] Song L, et al. A transcription factor hierarchy defines an environmental stress response network. Science, 2017. [PMID:27811239] Kerr TCC, et al. Ectopic expression of two AREB/ABF orthologs increases drought tolerance in cotton (Gossypium hirsutum). Plant Cell Environ., 2018. 41(5): p. 898-907 [PMID:28098349] Lyzenga WJ,Sullivan V,Liu H,Stone SL The Kinase Activity of Calcineurin B-like Interacting Protein Kinase 26 (CIPK26) Influences Its Own Stability and that of the ABA-regulated Ubiquitin Ligase, Keep on Going (KEG). Front Plant Sci, 2017. 8: p. 502 [PMID:28443108] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655] Fernando VCD,Al Khateeb W,Belmonte MF,Schroeder DF Role of Arabidopsis ABF1/3/4 during det1 germination in salt and osmotic stress conditions. Plant Mol. Biol., 2018. 97(1-2): p. 149-163 [PMID:29680877] Kim HJ, et al. Confirmation of Drought Tolerance of Ectopically Expressed AtABF3 Gene in Soybean. Mol. Cells, 2018. 41(5): p. 413-422 [PMID:29754472]