PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010108165.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

Dof

Protein Properties

Length: 310aa MW: 34060.1 Da PI: 9.1975

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010108165.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.3	3.5e-38	29	89	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++ +kcprC+s ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rk k+++ XP_010108165.1 29 PHQPQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRAK 89 56889***************************************************99875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	7.1E-33	31	87	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.705	33	87	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	3.0E-24	34	87	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	35	71	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence Send to blast
MNNNNKQNQD RRVVKAENQQ QQQQQPPPPH QPQKCPRCES LNTKFCYYNN YSLSQPRYFC 60 KTCRRYWTQG GTLRNVPVGG GCRKGKRAKT TSSSSSSGDS SRHSQPPQPQ PQPPVLPQAQ 120 QAVQAPQNLM IGSSPMMNSQ LLYPAAGSGY LSSFAAIQSS FNQPQSFAQA LMINSGNHDQ 180 LGSSSSSSSS TLSLLQGFND HIPSSFGSQQ QHQIPASAQF YPSPSDHHDQ DQGVTMINQT 240 SAKSSSQDWH HSFMMNNTSD QSALWNMGNA NTTTGNVRRN TTSSTSDHDH QPSFSPNQWP 300 DLPGSYGPPP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010108165.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010108165.1	0.0	dof zinc finger protein DOF1.4
TrEMBL	W9S9I5	0.0	W9S9I5_9ROSA; Dof zinc finger protein
STRING	XP_010108165.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF4145	32	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	2e-32	OBF binding protein 4

Link Out ? help Back to Top
Entrez Gene	21397626