PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010108474.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB_related
Protein Properties Length: 587aa    MW: 65302.9 Da    PI: 6.2467
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010108474.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.81.2e-08500530232
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmg 32 
                      +rWT  E++ l d+v+++G+g+Wk+I +   
   XP_010108474.1 500 KRWTLLEEDTLRDGVQKYGKGNWKLILKLYS 530
                      59************************99765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.8E-7495538IPR009057Homeodomain-like
SuperFamilySSF466891.35E-8496539IPR009057Homeodomain-like
CDDcd116601.27E-10500539No hitNo description
PfamPF002494.0E-6501529IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0009901Biological Processanther dehiscence
GO:0010152Biological Processpollen maturation
GO:0043067Biological Processregulation of programmed cell death
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    Send to blast
MDEPDKTLSR WLLEFLLRNS DDEPFAKRAL AVLPIPDDDP RLKKTVLLRT IEYEVSEGLV  60
TSTALENLEL IEELDSRRGS AAAAAGDSMK AAYCAVALDC TVRVLVGNGG KPGGKFLNAV  120
KRIWRGRVGR MEKSAAARES RLLSSDLRRC WDEVEAAIWD EGVCRKLMRI NTRKDALMLL  180
GAYLKEAWAL MGPSFVAWAA RLSAKQRFRE DGNGEESRGR GWSLNGLIEL RAELRDEVGL  240
RELANDRVRE NVVGDGVVLP DSDGLIVIDE PESTAKAVDD GVTLLGNNTD LAITNGPATT  300
DKVPREKVVL RSKHVGFQKR IRGPVRISDV EDLETDASPR RFNSIPTPEV NEAHEALKSS  360
SLDLQAAVTD PLPEAVREAE TVVSDLTTKN VIHEHPLENQ RRTEADAANP SIHTCTEPVQ  420
SCDVNLGNPS SSYPNNVPRP SLMERNNTAH TYEWDDSIDD SPEAMVNCKD RLHLPSPKKR  480
ALSPLKKYEP TKLCKRRKVK RWTLLEEDTL RDGVQKYGKG NWKLILKLYS DIFEERTEVA  540
GSGLGAGVNP GPEEEFSAST AFDRRKNLFS LRIAQNPAMK KKVNEQK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1477497KKRALSPLKKYEPTKLCKRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010108474.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024029311.10.0uncharacterized protein LOC21393956 isoform X2
TrEMBLW9RZT00.0W9RZT0_9ROSA; Uncharacterized protein
STRINGXP_010108474.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28243260
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06910.12e-16TRF-like 7