PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010108525.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family GeBP
Protein Properties Length: 257aa    MW: 28296.7 Da    PI: 6.4208
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010108525.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57385.85.6e-2780168298
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                     lfqr+wse+De ++L+G+idf+ak+ ++p   d+++f++f+kks+++ +sk+ l++K+rrLKk  +kk +          +k+h+  +f+lsk+i
  XP_010108525.1  80 LFQRVWSEDDETAILKGMIDFTAKRSADPAVaDMNEFHDFIKKSLQIGASKTRLSDKVRRLKKSSRKKINP---------TKPHEMAAFQLSKRI 165
                     69*************************88766******************************976666655.........9************** PP

          DUF573  96 Wgs 98 
                     Wgs
  XP_010108525.1 166 WGS 168
                     *95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.3E-2381167IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MRPLYHEDPP ADSSSSEGEV ASSEETSGSE HEEHEMNMKS KEESPPKAKK GSHSNAENGG  60
SEEEKPEPKK SEGDDSKKVL FQRVWSEDDE TAILKGMIDF TAKRSADPAV ADMNEFHDFI  120
KKSLQIGASK TRLSDKVRRL KKSSRKKINP TKPHEMAAFQ LSKRIWGSGE PNSKGAAKSG  180
QKVKSEALSS AVALAGIEMA EIDRKAGASA SLSWPEYRVK HGLDLILESK KAEGEAKWEK  240
LCLAELDLFV EKSIDQV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010108525.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024029327.11e-146probable transcription factor At4g00390
TrEMBLW9RZW60.0W9RZW6_9ROSA; Uncharacterized protein
STRINGXP_010108525.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18313490
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.17e-14DNA-binding storekeeper protein-related transcriptional regulator